Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 125 7e-24 >seq3 Length=1617349 Score = 125 bits (138), Expect = 7e-24 Identities = 395/607 (65%), Gaps = 14/607 (2%) Strand=Plus/Minus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 || ||| || || |||||||| | |||||| ||| || || |||||| || | || Sbjct 421609 TAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAG 421550 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || ||||| || | || ||| | || || |||| ||||| | || || Sbjct 421549 AGAAACGGGTAGAGCGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT 421490 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTT--TAAGATGTTTAAACATCAGACATGCG 16969 || | || || | ||| | |||| | | ||| | || | || ||| || Sbjct 421489 TCTTTCGACAA--TCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCA 421432 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 || ||| || || || || ||||||| || | |||||| || || ||||| || ||| Sbjct 421431 AAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGC 421372 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 ||| || ||||| ||||| || || || ||||| || ||||| || || | ||| Sbjct 421371 ATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCT 421312 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149 || |||| || ||||| | |||| ||| ||||| || || | | |||||||||| Sbjct 421311 TCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCAT 421252 Query 17150 TTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 | |||| | || |||| | ||| || ||| ||||| ||||| || || Sbjct 421251 CTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATG----GTTTCAATGGCATTCAA 421196 Query 17206 TAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264 || || | ||||| |||| || | || || || || || | | || ||| Sbjct 421195 CAAGAAGTCGTGTTCCT-TAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTT 421137 Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324 ||||||| ||||| ||||| || || || ||||| || || |||||| | |||| Sbjct 421136 CGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 421077 Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384 | || || | |||| |||| | | |||||||||||||| || ||| || || | Sbjct 421076 GCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 421017 Query 17385 AAAACGC 17391 | ||||| Sbjct 421016 AGAACGC 421010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545056577120