Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq7 242 4e-59
seq3 167 3e-36
seq5 138 1e-27
>seq7
Length=951660
Score = 242 bits (268), Expect = 4e-59
Identities = 584/882 (66%), Gaps = 4/882 (0%)
Strand=Plus/Plus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
||||||| ||||||||||| | || | ||| | || || | ||| | ||||||
Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108
Query 53901 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958
| | | ||| || | | |||||| ||||| || |||||| |||||| ||
Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346
Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198
||||| || || | ||| | || | | ||||| | ||||| || || || || |
Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406
Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258
||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466
Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526
Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586
Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646
Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706
Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766
Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618
|||| | | ||| ||| ||| | |||||||| || |||||| || || ||||| ||
Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826
Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|||||| || || |||| ||||| | ||| | |||||
Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTT 337868
>seq3
Length=1617349
Score = 167 bits (184), Expect = 3e-36
Identities = 577/886 (65%), Gaps = 22/886 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
||||| || ||| |||| || || || || ||| ||||| | | || || || |
Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 421611
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
| ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | |
Sbjct 421610 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 421551
Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| ||| || ||||| | | ||| | |||| ||| || || || ||||| ||
Sbjct 421550 GAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 421492
Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
|| |||| || | | | | || | | | | | ||||| | || | ||||||
Sbjct 421491 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACA 421436
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || ||| ||| | || || ||||| | ||| |||||||| || || || | ||
Sbjct 421435 GGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 421376
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| | || ||| || | ||| || |||| || || || ||||| || || |
Sbjct 421375 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 421316
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT---GTAT 24313
||||| || || || || |||| | |||||| | || ||| ||||| | ||
Sbjct 421315 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAAT 421256
Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372
||| || || ||||| | ||||| | ||| | || || || || || ||||| |
Sbjct 421255 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 421197
Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432
| | ||| | ||| ||| ||| || | || || |||||||| | ||| |||
Sbjct 421196 ACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTT 421137
Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
| || || |||||||| || ||||| || ||||||||||| | || || | ||| |
Sbjct 421136 CGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 421077
Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552
| || || | | || ||| | || ||||| ||||| || || || || ||||
Sbjct 421076 GCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 421017
Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609
| ||||| | || || ||| || | ||| ||| || || || ||||| |
Sbjct 421016 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 420957
Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
||| | ||| || || | ||| | |||||| | |||||||| || ||||| || | |
Sbjct 420956 CATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 420897
Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | |||||| || || || | ||||| |||| |||||
Sbjct 420896 TATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851
>seq5
Length=1432259
Score = 138 bits (152), Expect = 1e-27
Identities = 180/247 (73%), Gaps = 4/247 (2%)
Strand=Plus/Minus
Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088
|| || | |||||| ||||| |||||||| | ||| ||||| |||| || || |
Sbjct 99808 ACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATT 99749
Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148
|| || ||||| ||||||| | || | | ||| | |||||||| |||||| |||
Sbjct 99748 TCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGT 99689
Query 54149 TCCAAGTATATGGTCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 54206
||||||||||| || || | ||||| |||||||| || || ||||| | ||||| |
Sbjct 99688 TCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGG 99631
Query 54207 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGG 54266
| ||||| ||| |||| | || ||| |||| | |||||| || | |||||| | ||| |
Sbjct 99630 CTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTG 99571
Query 54267 AGATATA 54273
|||||||
Sbjct 99570 AGATATA 99564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720976592320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |