Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3 181 1e-40 >seq3 Length=1617349 Score = 181 bits (200), Expect = 1e-40 Identities = 532/811 (66%), Gaps = 13/811 (2%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || || Sbjct 421713 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 421654 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078 || || | |||||||| | | || || | | || || ||| || || ||| Sbjct 421653 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 421594 Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138 ||||| | || || ||||| |||||| |||||| || | || ||| || | || Sbjct 421593 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 421534 Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198 || | || | | ||||| || | ||| ||||| |||| || |||| | ||| | Sbjct 421533 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 421477 Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255 ||| | | || ||| || || | || | | ||| ||||| || ||||| Sbjct 421476 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAG 421417 Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315 ||||| || || | || || |||||||| || || | ||||||||| | || || Sbjct 421416 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 421357 Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375 || | ||| || || || || || |||||||| || || | |||||| || || || || Sbjct 421356 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 421297 Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttctatccattttttagcccaatt 16434 |||||||||| ||| |||| | || | | | |||||| | | ||||| | Sbjct 421296 GCAACCAATCTTTCAGCGTATAGGGCT-TCGTCATCACGAATCCATCTAATGGCCCATTG 421238 Query 16435 tgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTT 16494 || |||| ||| | ||| | || || ||||| || || | | | ||| || Sbjct 421237 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTT 421178 Query 16495 GCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCAT 16554 ||| || ||||| || || | || ||| |||| || || || || ||||| Sbjct 421177 AGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCAT 421118 Query 16555 TGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCT 16614 || || ||||| || || || | ||||| | ||||| || |||| | || | Sbjct 421117 CATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTT 421058 Query 16615 TTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGTT 16673 ||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | || Sbjct 421057 TTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-G 420999 Query 16674 TAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGATA 16730 || ||| | | ||||| || | | || ||||||| || ||| || || | Sbjct 420998 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACA 420939 Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||||| ||||| ||||||||||||| || Sbjct 420938 AATCGATTTCTTCAGCAGTCCAAAAAGAGGC 420908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511514362400