Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7 284 2e-71
seq3 196 6e-45
seq5 127 3e-24
>seq7
Length=951660
Score = 284 bits (314), Expect = 2e-71
Identities = 751/1141 (66%), Gaps = 18/1141 (2%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108
Query 63139 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196
| | | ||| || | | | |||||| ||||| | |||||| ||| || ||
Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166
Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256
|| || |||||| || | || ||| | ||| | | ||| | ||| ||| |
Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226
Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286
Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376
|| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346
Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406
Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496
||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466
Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63556
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526
Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616
|| | |||||||| | || ||| || || ||||| || || ||||| ||| |||
Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586
Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676
|| ||||| | ||| ||||| |||||||| || ||| ||| || ||||| ||
Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646
Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706
Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766
Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856
|||| ||| || ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826
Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916
|||||| || || |||| ||||| | ||| | || || | |||| |||
Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 337880
Query 63917 GTTAACTATATCCATGGTA-ATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 63970
||| | || | ||| | | || | ||||| || || || || | ||| | ||
Sbjct 337881 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 337940
Query 63971 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 64030
|| || || | || | || || || | ||||| ||| | || | |||| |||
Sbjct 337941 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTT 338000
Query 64031 GTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 64090
||| | || || ||||| ||||| ||||| | | | || ||||| || || || ||
Sbjct 338001 GTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT 338060
Query 64091 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149
|| || ||| | |||| || |||| | || ||||| || || ||||| || | ||
Sbjct 338061 -CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCAT 338119
Query 64150 A 64150
|
Sbjct 338120 A 338120
>seq3
Length=1617349
Score = 196 bits (216), Expect = 6e-45
Identities = 582/889 (65%), Gaps = 28/889 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || || || || || || || ||||| ||| || || || || |
Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| ||||| || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
||| || ||||| | | ||| | |||| ||| || || || | ||| || ||
Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGAT-------GTAAT--AAATGTTTAAACATCAA 33580
||| ||| || || ||||| || | ||||| | || | |||
Sbjct 421489 ---TCT------TTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 421439
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| || || ||| ||||| || || ||||| | ||| |||||||| || || || |
Sbjct 421438 ACAGGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 421379
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| | || ||| || | ||| || |||| |||||| || || || || ||
Sbjct 421378 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 421319
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757
| ||||| || ||||| || |||| | ||| || | || ||| ||||| |
Sbjct 421318 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 421259
Query 33758 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816
||||| || || ||||| | ||||| | ||| | || || ||||| |||||||
Sbjct 421258 AATCCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 421200
Query 33817 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876
| || | ||| | ||| ||| ||| || | ||||| || ||||| | |||
Sbjct 421199 TCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 421140
Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936
|||| || || |||||||| || || || || ||||||||||| | || || | ||
Sbjct 421139 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 421080
Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996
| ||||| || | | | || ||| | || ||||| ||||| || ||||| || |
Sbjct 421079 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 421020
Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCC 34053
|||| ||||| | || || ||| || | ||| ||| || || || ||||
Sbjct 421019 CAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCC 420960
Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| |||| | ||| || || | ||| | |||||| | |||||||| || ||||| ||
Sbjct 420959 AGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTC 420900
Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
| ||||| | |||||| || || || | ||||||||||| |||||
Sbjct 420899 TCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851
>seq5
Length=1432259
Score = 127 bits (140), Expect = 3e-24
Identities = 190/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326
|| || | |||||| ||||| |||||||| | ||| ||||| |||| | || |
Sbjct 99808 ACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATT 99749
Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386
|| || ||||| ||||||| | || | | ||| | |||||||| |||||| |||
Sbjct 99748 TCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGT 99689
Query 63387 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63444
||||||||||| || || | ||||| |||||||| || || ||||| | ||||| |
Sbjct 99688 TCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGG 99631
Query 63445 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63504
| ||||| ||| |||| | || ||| |||| | ||| || || ||||||| | || |
Sbjct 99630 CTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTG 99571
Query 63505 AGATATAGCCTCCACTGGCACGAATATT 63532
||||||| | ||| | || | |||||
Sbjct 99570 AGATATAAGCACCATTTGCCCTTATATT 99543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816938691520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |