Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq7 264 1e-65 seq3 167 3e-36 seq5 158 2e-33 >seq7 Length=951660 Score = 264 bits (292), Expect = 1e-65 Identities = 746/1138 (66%), Gaps = 12/1138 (1%) Strand=Plus/Plus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108 Query 65932 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166 Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049 || || |||||| || || || ||| | ||| | | ||| | ||| ||| | Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226 Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109 || | || |||| ||||| || ||||| || ||||| || ||| || || ||||| Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286 Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169 | | ||| || || || |||||| | | |||| ||| | | ||||| | Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346 Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406 Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| || Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCC 66349 || || | || || || | | |||||| || ||| | ||| || || || Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526 Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586 Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646 Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529 | || || |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706 Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766 Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709 |||||| || || |||| ||||| | ||| | ||||| | |||| || | | Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTC 337886 Query 66710 GTTAACTA---CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766 | || | ||| || | || | ||||| || || || || | ||| | || || Sbjct 337887 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 337943 Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826 ||||| | || | || || || | ||||| ||| | || | |||| ||||| Sbjct 337944 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 338003 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 | || || | ||| ||||||||||| | | | || ||||| || || || || || Sbjct 338004 CAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 338062 Query 66887 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || ||| | |||| || |||| | || ||||| || || ||||| || | ||| Sbjct 338063 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120 >seq3 Length=1617349 Score = 167 bits (184), Expect = 3e-36 Identities = 572/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| || ||| | |||||||| ||||| |||||||| | || || || ||| Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||| || |||||||| || | || || || ||| || || || || | Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | ||| ||||| |||||||| | ||| ||||||| ||| ||||| || | || Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549 Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490 Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | || | | | | || | | | | | ||||| | || | |||||| || | Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 421431 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | ||| ||| | || || ||||| | ||| |||||||| || || || | || |||| Sbjct 421430 AGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 421371 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | | || ||| || | ||| || |||| || || || ||||| || || | |||| Sbjct 421370 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 421311 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 36340 | || || || || |||| | ||| || | || ||| ||||| | ||||| | Sbjct 421310 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 421251 Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400 | || ||||| | ||||| | ||| | || || || || || ||||| || | Sbjct 421250 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 421192 Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 36460 ||| | ||| ||| ||| || | || || |||||||| | ||| |||| || Sbjct 421191 AAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 421132 Query 36461 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 36520 || |||||||| || ||||| || ||||||||||| | || || | ||| || || Sbjct 421131 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 421072 Query 36521 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 36580 || | | | || ||| | || ||||| ||||| || || || || ||||| ||| Sbjct 421071 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 421012 Query 36581 GCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCATTG 36637 || | || || ||| || | ||||| | || || || ||||| |||| Sbjct 421011 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 420952 Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697 | ||| || || | ||| | |||||| | |||||||| || ||||| || | ||||| Sbjct 420951 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 420892 Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | |||||| || || || | ||||| |||| ||||| Sbjct 420891 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851 >seq5 Length=1432259 Score = 158 bits (174), Expect = 2e-33 Identities = 587/908 (65%), Gaps = 33/908 (4%) Strand=Plus/Minus Query 65442 TTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTC 65501 |||||||| |||||| | ||||| | ||| | | ||||| ||||| || |||| Sbjct 100441 TTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATAGTTTCAAATATCTGT 100382 Query 65502 TTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA-AGAGAATAAACGCGT 65559 ||||| | || | | || || ||||| || | | || |||| ||||| || | Sbjct 100381 TTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTACAGAGCATAAAAGCAT 100324 Query 65560 CTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTT 65619 |||| | |||||||||||||||| | | |||| ||||| ||| ||| || | Sbjct 100323 CTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGATTGCCTCTTTTTGCCT 100264 Query 65620 CTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGA 65679 |||| ||||| ||| || ||||||| || ||| ||||| || || | ||||| | Sbjct 100263 CTGGGATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCCTAACCAACACTTTAA 100204 Query 65680 CCACATCCTTCAGTTTGAGAAAATCAAATCGC------TCATC------TATT---ACAA 65724 | ||| | || | | ||| |||||| ||||| |||| || Sbjct 100203 CAACACGATGAAGAGTTACAAAGTCAAATACAGGAGAATCATCAGAAGTTATTTTGACGT 100144 Query 65725 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 65784 |||| | ||| || ||||| ||||| || || ||||| || | | ||| | Sbjct 100143 ACATAGGTAGTGCGACTGATGCAAGATTGCAGACTGCTACTTCCTCTGGTGAACTATACT 100084 Query 65785 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 65844 | || ||| ||||||||| |||| ||| ||||| |||| || || || Sbjct 100083 CCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGGTTGGACT 100024 Query 65845 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 65904 | | || || | |||||||||||| ||||| ||| || || || | ||| || || Sbjct 100023 TCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGACTTTGTA 99964 Query 65905 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTATCTCTTTTCTCTTTC 65962 ||| | ||| | | | || || ||| | ||| | ||| || || || | Sbjct 99963 GAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAATCAATTCTCGCT--C 99906 Query 65963 GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT---CCAGGACA 66019 || | ||| | || |||||| | | || | || ||| || || | Sbjct 99905 ATACTTTTCATATAGGGTTTTGAACTC-TGTACCATAGCA--GTCAGATAAACCTGTTGC 99849 Query 66020 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 66079 |||||| |||| | | ||||| ||| | | | | || || | |||||| ||||| Sbjct 99848 TTCATCTGGACTAAAAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATC 99789 Query 66080 AGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 66139 |||||||| | ||| |||||| |||| || || ||| || ||||| |||||| Sbjct 99788 CGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 99729 Query 66140 TTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA- 66198 | | || | | ||| | |||||||| |||||| |||||||||||||| || || Sbjct 99728 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 99671 Query 66199 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 66257 | ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | | Sbjct 99670 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGC 99611 Query 66258 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCA 66317 | ||| |||| | |||||| || |||||||| | ||| |||||||| ||| |||| Sbjct 99610 AGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCC 99551 Query 66318 CGAATATT 66325 | ||||| Sbjct 99550 CTTATATT 99543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172108918560