Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq7 233 3e-56 seq3 158 2e-33 seq5 154 2e-32 >seq7 Length=951660 Score = 233 bits (258), Expect = 3e-56 Identities = 742/1142 (65%), Gaps = 20/1142 (2%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || || ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108 Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951 | | | || | || | | |||||| ||||| || || ||| ||| || || Sbjct 337109 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166 Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 || || || ||| ||| || || ||| || ||| | | ||| | ||| ||| | Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226 Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071 | | | |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286 Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131 | | || || || || |||||| | | |||| ||| | | ||||| || Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346 Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTAT 72191 ||||| || || | ||| | ||| | | || || | ||||| || || || || | Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406 Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251 ||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| || Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466 Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCC 72311 || || | || || || | | |||||| ||| ||| | ||| || || || Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526 Query 72312 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 72371 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586 Query 72372 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 72431 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646 Query 72432 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 72491 | || || |||||||| || || || || ||||| ||| ||||| || || | | | Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706 Query 72492 TGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 ||| ||||| | || || || || || || | ||| | ||| || ||||| | Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766 Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 |||| | | ||| || ||| | | |||||| || |||||| || || ||||| || Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826 Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 |||||| || || |||| ||||| | ||| || | ||||| | ||| ||| Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAAT---CGCA--GAGTTCA-AAGTATCTTT 337880 Query 72672 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 72724 ||| | || | || || |||| ||||| || || || || | ||| | | Sbjct 337881 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 337939 Query 72725 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 72784 | || || || | || | || || || | ||||| ||| | || | |||| || Sbjct 337940 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 337999 Query 72785 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAG 72844 |||| | || || | ||| ||||| ||||| | | | || |||||||| || || | Sbjct 338000 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 338059 Query 72845 TACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 72903 | || || ||| | |||| || |||| | || ||||| || || ||||| || | | Sbjct 338060 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 338118 Query 72904 TA 72905 || Sbjct 338119 TA 338120 >seq3 Length=1617349 Score = 158 bits (174), Expect = 2e-33 Identities = 573/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || ||| | |||||||| ||||| || || || |||| || || ||| Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || || || || || || ||| || || || || | Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | || Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490 Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068 |||| || | | | | || | | | | | ||||| | || | |||||| | Sbjct 421489 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGG 421434 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | || ||| ||||| || |||||||| | ||| |||||||| || || || | || | Sbjct 421433 CAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTG 421374 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 |||| | || ||| || | ||| || || | || || || ||||| || || | | Sbjct 421373 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACAC 421314 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCC 42245 |||| || || || || |||| | ||| || | || ||| ||||| | |||| Sbjct 421313 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCC 421254 Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 | || || ||||| | ||||| | ||| | || || ||||| |||||||| || Sbjct 421253 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 421195 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 | ||| | ||| ||| ||| || | || || || ||||| | ||| |||| Sbjct 421194 AAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCG 421135 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || |||||||| || || || || ||||||||||| |||| || | || || Sbjct 421134 GAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGC 421075 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 || || | | | || ||| | || ||||||||||| || || || || ||||| Sbjct 421074 ACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 421015 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540 ||||| | || || ||| || | |||| | ||| || || ||||| || Sbjct 421014 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 420956 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || | ||| || || | ||| | |||||| | |||||||| || || || || | || Sbjct 420955 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 420896 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||| | |||||| || || || | |||||||||| ||||| Sbjct 420895 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851 >seq5 Length=1432259 Score = 154 bits (170), Expect = 2e-32 Identities = 593/917 (65%), Gaps = 31/917 (3%) Strand=Plus/Minus Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432 |||||||| | | ||||| | || | ||| || || |||||| | ||||| | Sbjct 100472 TGATCCTGGGAAACTTTCGTAGTGGCCATATTTCTCAGCGAGTTCAATAGATGCCTCAAT 100413 Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491 ||| ||| ||||| ||||| || |||| ||||| | || | | || || | Sbjct 100412 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 100354 Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550 |||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | | Sbjct 100353 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 100295 Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610 |||| |||||| ||| ||| || ||||| ||||| ||| || ||||||| Sbjct 100294 GGTCGGTGTCTTAGATTGCCTCTTTTTGCCTCTGGGATAGGGTAAGCTCCAACATCTATA 100235 Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670 || ||| ||||| || || | ||||| || ||| | || | | ||| |||||| Sbjct 100234 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGAGTTACAAAGTCAAAT 100175 Query 71671 CTCC------CATCTA---TTACAAACACGTTCA-----AG-GCAACAGATGCCAGATTA 71715 |||| ||| |||| || || || || ||||| ||||| Sbjct 100174 ACAGGAGAATCATCAGAAGTTATTTTGACGTACATAGGTAGTGCGACTGATGCAAGATTG 100115 Query 71716 CAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACAC 71775 || || ||||| || | | ||| | | |||||| ||||||||| || Sbjct 100114 CAGACTGCTACTTCCTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGACGAC 100055 Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835 || ||| ||||| |||| || || ||| | || || | |||||||||||| || Sbjct 100054 TTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCATGAATCCTTATAAAGCATG 99995 Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895 || ||| || || || | ||| || || ||| | ||| | | | || || Sbjct 99994 AAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTC 99935 Query 71896 ATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 ||| | ||| ||| | || ||||| || || | | ||||| || |||||| | Sbjct 99934 ATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAACTC-TG 99877 Query 71955 TCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 | || |||| ||| ||| || | ||||| |||| | | ||||| ||| | Sbjct 99876 TACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTC 99819 Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071 || | | || || | |||||| ||||| |||||||| | ||| ||||| |||| Sbjct 99818 ATTGTTTTCAACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCG 99759 Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131 || || || || ||||| ||||||| | || | | ||| | |||||||| Sbjct 99758 GGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCC 99699 Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGATCT 72189 |||||| |||||||||||||| || || | || || |||||||| || || ||||| Sbjct 99698 ATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCG 99641 Query 72190 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCA 72249 | ||||| || ||||| ||| |||| | || ||| |||| | |||||| || | |||| Sbjct 99640 ACATATCTGGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCA 99581 Query 72250 TTGGTCCCGGAGATATA 72266 || | ||| |||||||| Sbjct 99580 TTCGACCCTGAGATATA 99564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138495303840