Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 >seq3 Length=1617349 Score = 120 bits (132), Expect = 3e-22 Identities = 296/436 (68%), Gaps = 15/436 (3%) Strand=Plus/Plus Query 50410 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50469 || ||| | || || ||||| || || |||||||||||||| || ||| ||| || Sbjct 421280 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 421339 Query 50470 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50529 ||||| || | | || | || | ||||| || | || || ||||| ||| Sbjct 421340 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 421399 Query 50530 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50589 |||| | || ||||| ||||||| |||||||| |||||| | | || | | Sbjct 421400 ATTTGCAGAGATGAAGGCTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 421456 Query 50590 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50647 || ||| || || | ||| | | | | | || ||| |||||| || || |||| Sbjct 421457 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 421514 Query 50648 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50706 |||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || || Sbjct 421515 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 421573 Query 50707 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50764 ||| | | ||| | || ||||||||||||||| | | ||||| || |||| || Sbjct 421574 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 421631 Query 50765 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50823 ||||||| || | ||| |||||| || |||||| | ||||| || |||| || ||| Sbjct 421632 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 421690 Query 50824 ACAAACTTTTTCGAAA 50839 || || || ||||||| Sbjct 421691 ACCAATTTCTTCGAAA 421706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013867634880