Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-27 seq6 109 9e-20 >seq8 Length=997253 Score = 134 bits (148), Expect = 2e-27 Identities = 192/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| ||||||||||||||||| Sbjct 302242 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCTAT 302184 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 302183 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 302124 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | | |||||| |||||| || || || || Sbjct 302123 CCGTAACGTTCTAAAGACTTTCTTGGAATCTGTTATCAGAGATGCTGTCACATACACTGA 302064 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| ||||| | ||| |||| || || ||||| | ||||| Sbjct 302063 ACACGCCAAGAGAAAGACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 302004 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 302003 TAGAACTTTGTATGGTTTCGGTGGTTAA 301976 >seq6 Length=1269051 Score = 109 bits (120), Expect = 9e-20 Identities = 186/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| |||||||||||||| || Sbjct 297598 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCCAT 297540 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 297539 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 297480 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | |||| ||| || || || || || || Sbjct 297479 CCGTAACGTTCTAAAGACTTTCTTGGAATCCGTCATCAGAGACGCCGTCACATACACTGA 297420 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 297419 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTGTACGCCTTGAAGAGACAAGG 297360 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||||||| || |||| Sbjct 297359 TAGAACTTTGTATGGTTTCGGTGGTTA 297333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075123198212