Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq7 284 2e-71 seq3 185 1e-41 seq5 129 7e-25 >seq7 Length=951660 Score = 284 bits (314), Expect = 2e-71 Identities = 751/1142 (66%), Gaps = 20/1142 (2%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||||||||| || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108 Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | | ||| || | | | |||||| ||||| || |||||| ||| || || Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || |||||| || || || ||| | ||| | | ||| | ||| ||| | Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || | || |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | | ||| || || || |||||| | | |||| ||| | | ||||| || Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| || Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 ||||| | || || || | | |||||| || ||| | ||| || || || Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | |||||||| | || ||| || || ||||| || ||||| || ||| ||| Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685 | || || |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706 Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865 |||||| || || |||| ||||| | ||| | ||||| | |||| ||| Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 337880 Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918 ||| | || | || || |||| ||||| || || || || | ||| | | Sbjct 337881 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 337939 Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978 | || || || | || | || || || | ||||| ||| | || | |||| || Sbjct 337940 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 337999 Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038 |||| | || || | ||| ||||| ||||| | | | || ||||| || || || | Sbjct 338000 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 338059 Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097 | || || ||| | |||| || |||| | || ||||| || || ||||| || | | Sbjct 338060 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 338118 Query 64098 TA 64099 || Sbjct 338119 TA 338120 >seq3 Length=1617349 Score = 185 bits (204), Expect = 1e-41 Identities = 576/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || ||| | |||||||| ||||| ||||| || |||| || || ||| Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || || || || || || || ||| || || || || | Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | ||| || || || ||||| | ||| ||||||| ||| ||||| || | || Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490 Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | || | | | | || | | | | | ||||| | || | |||||| || | Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 421431 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | ||| ||||| || || ||||| | ||| | |||||| || || || | || |||| Sbjct 421430 AGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 421371 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | | || ||| || | ||| || |||| |||||| || ||||| || || | |||| Sbjct 421370 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 421311 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-C 33486 | || ||||| || |||| | ||| || | || ||| ||||| | ||||| | Sbjct 421310 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 421251 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || ||||| | ||||| | ||| | || || ||||| |||||||| || | Sbjct 421250 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 421192 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 ||| | ||| ||| ||| || | ||||| || ||||| | ||| |||| || Sbjct 421191 AAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 421132 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 || |||||||| || || || || ||||||||||| | || || | ||| || || Sbjct 421131 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 421072 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | | || |||| |||| ||||| ||||| || || || || ||||| ||| Sbjct 421071 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 421012 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCATTG 33783 || | || || ||| || | ||| ||| || || || ||||| |||| Sbjct 421011 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 420952 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | ||| || || | ||| | |||||| | |||||||| || ||||| || | ||||| Sbjct 420951 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 420892 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | |||||| || | || | ||||||||||| ||||| Sbjct 420891 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851 >seq5 Length=1432259 Score = 129 bits (142), Expect = 7e-25 Identities = 178/247 (72%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 || || | |||||| ||||| |||||||| | ||| ||||| |||| || || | Sbjct 99808 ACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATT 99749 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || || ||||| ||||||| | || | | ||| | |||||||| |||||| ||| Sbjct 99748 TCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGT 99689 Query 63336 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63393 ||||||||||| || || | ||||| |||||||| || || ||||| | ||||| | Sbjct 99688 TCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGG 99631 Query 63394 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63453 | ||||| ||| |||| | || ||| |||| | ||| || || ||||||| | || | Sbjct 99630 CTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTG 99571 Query 63454 AGATATA 63460 ||||||| Sbjct 99570 AGATATA 99564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946545905440