Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq7 284 2e-71
seq3 185 1e-41
seq5 129 7e-25
>seq7
Length=951660
Score = 284 bits (314), Expect = 2e-71
Identities = 751/1142 (66%), Gaps = 20/1142 (2%)
Strand=Plus/Plus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108
Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145
| | | ||| || | | | |||||| ||||| || |||||| ||| || ||
Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166
Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 337167 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 337226
Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 337227 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 337286
Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 337287 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 337346
Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 337347 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 337406
Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445
||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 337407 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 337466
Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 337467 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 337526
Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565
|| | |||||||| | || ||| || || ||||| || ||||| || ||| |||
Sbjct 337527 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 337586
Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625
|| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 337587 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 337646
Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 337647 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 337706
Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 337707 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 337766
Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 337767 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 337826
Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865
|||||| || || |||| ||||| | ||| | ||||| | |||| |||
Sbjct 337827 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 337880
Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 337881 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 337939
Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 337940 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 337999
Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038
|||| | || || | ||| ||||| ||||| | | | || ||||| || || || |
Sbjct 338000 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 338059
Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 338060 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 338118
Query 64098 TA 64099
||
Sbjct 338119 TA 338120
>seq3
Length=1617349
Score = 185 bits (204), Expect = 1e-41
Identities = 576/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || || || || || || || || || ||| || || || || |
Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| ||| || || || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549
Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490
Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| || | | | | || | | | | | ||||| | || | |||||| || |
Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 421431
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| ||| ||||| || || ||||| | ||| | |||||| || || || | || ||||
Sbjct 421430 AGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 421371
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| | || ||| || | ||| || |||| |||||| || ||||| || || | ||||
Sbjct 421370 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 421311
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-C 33486
| || ||||| || |||| | ||| || | || ||| ||||| | ||||| |
Sbjct 421310 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 421251
Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546
| || ||||| | ||||| | ||| | || || ||||| |||||||| || |
Sbjct 421250 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 421192
Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606
||| | ||| ||| ||| || | ||||| || ||||| | ||| |||| ||
Sbjct 421191 AAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 421132
Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666
|| |||||||| || || || || ||||||||||| | || || | ||| || ||
Sbjct 421131 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 421072
Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726
|| | | | || |||| |||| ||||| ||||| || || || || ||||| |||
Sbjct 421071 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 421012
Query 33727 GCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCATTG 33783
|| | || || ||| || | ||| ||| || || || ||||| ||||
Sbjct 421011 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 420952
Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843
| ||| || || | ||| | |||||| | |||||||| || ||||| || | |||||
Sbjct 420951 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 420892
Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
| |||||| || | || | ||||||||||| |||||
Sbjct 420891 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851
>seq5
Length=1432259
Score = 129 bits (142), Expect = 7e-25
Identities = 178/247 (72%), Gaps = 4/247 (2%)
Strand=Plus/Minus
Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275
|| || | |||||| ||||| |||||||| | ||| ||||| |||| || || |
Sbjct 99808 ACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATT 99749
Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335
|| || ||||| ||||||| | || | | ||| | |||||||| |||||| |||
Sbjct 99748 TCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGT 99689
Query 63336 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63393
||||||||||| || || | ||||| |||||||| || || ||||| | ||||| |
Sbjct 99688 TCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGG 99631
Query 63394 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63453
| ||||| ||| |||| | || ||| |||| | ||| || || ||||||| | || |
Sbjct 99630 CTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTG 99571
Query 63454 AGATATA 63460
|||||||
Sbjct 99570 AGATATA 99564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946545905440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |