Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 116 3e-21 seq3 102 7e-17 >seq5 Length=1432259 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || ||||||| || | |||||| | |||||||| | | Sbjct 1263876 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1263935 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 1263936 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1263995 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || |||||| | ||||||| |||| | || || ||| Sbjct 1263996 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1264055 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || || || ||||||||||| || Sbjct 1264056 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1264102 >seq3 Length=1617349 Score = 102 bits (112), Expect = 7e-17 Identities = 377/575 (66%), Gaps = 33/575 (6%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 |||| ||||| || ||||| || || || ||| ||||| || | |||||| ||||| Sbjct 421713 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 421654 Query 104662 GGATTCAAAGTC-TTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCAC 104720 || || | | | || | ||||| | || || | | | || |||| || || || Sbjct 421653 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 421595 Query 104721 AAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780 |||||||| ||| | | ||| ||| || ||||| |||| | | ||||||| ||| Sbjct 421594 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 421535 Query 104781 GTTAGTaaaaaaa-TCTTTCTCGATGTCCACGGCTTCCTTAAACATG--TTCAGCAC-CT 104836 || | || | ||||| ||||| || || ||||| | | || ||| || || Sbjct 421534 GTCGATGAAGTATCTCTTT-TCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 421476 Query 104837 TGCTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAG-AGGCAGGCAAAG 104895 | || | |||||| |||| ||| || || ||||| | ||||||||| Sbjct 421475 TTGGATCTG---GCTTGT--TCTT---CAAA-----TGATGGAATAGCAAACAGGCAAAG 421429 Query 104896 TCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-G 104954 || |||||||| ||||||||||| |||| | |||||| | | ||||| || || | Sbjct 421428 TCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATC 421369 Query 104955 AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGAC 105014 | ||||| | |||| || || |||||||||| || ||| |||||||| || Sbjct 421368 AAACCCTTCT------TCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 421316 Query 105015 ACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTT--TCA 105072 |||||| ||| || ||||| |||| | ||| ||| | ||| || | | | | Sbjct 421315 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCG--TATAGGGCTTCGTCATCACGA 421258 Query 105073 ATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCGATGGCATTC 105132 |||||| | |||||| ||||| ||||| |||| || ||||||||| Sbjct 421257 ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTC 421198 Query 105133 AAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA 105167 || | |||| ||||| |||||| || ||||| Sbjct 421197 AACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTA 421163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935559853020