Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 3e-21
seq3 102 7e-17
>seq5
Length=1432259
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || ||||||| || | |||||| | |||||||| | |
Sbjct 1263876 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1263935
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 1263936 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1263995
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | | || |||||| | ||||||| |||| | || || |||
Sbjct 1263996 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1264055
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 1264056 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1264102
>seq3
Length=1617349
Score = 102 bits (112), Expect = 7e-17
Identities = 377/575 (66%), Gaps = 33/575 (6%)
Strand=Plus/Minus
Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661
|||| ||||| || ||||| || || || ||| ||||| || | |||||| |||||
Sbjct 421713 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 421654
Query 104662 GGATTCAAAGTC-TTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCAC 104720
|| || | | | || | ||||| | || || | | | || |||| || || ||
Sbjct 421653 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 421595
Query 104721 AAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780
|||||||| ||| | | ||| ||| || ||||| |||| | | ||||||| |||
Sbjct 421594 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 421535
Query 104781 GTTAGTaaaaaaa-TCTTTCTCGATGTCCACGGCTTCCTTAAACATG--TTCAGCAC-CT 104836
|| | || | ||||| ||||| || || ||||| | | || ||| || ||
Sbjct 421534 GTCGATGAAGTATCTCTTT-TCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 421476
Query 104837 TGCTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAG-AGGCAGGCAAAG 104895
| || | |||||| |||| ||| || || ||||| | |||||||||
Sbjct 421475 TTGGATCTG---GCTTGT--TCTT---CAAA-----TGATGGAATAGCAAACAGGCAAAG 421429
Query 104896 TCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-G 104954
|| |||||||| ||||||||||| |||| | |||||| | | ||||| || || |
Sbjct 421428 TCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATC 421369
Query 104955 AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGAC 105014
| ||||| | |||| || || |||||||||| || ||| |||||||| ||
Sbjct 421368 AAACCCTTCT------TCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 421316
Query 105015 ACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTT--TCA 105072
|||||| ||| || ||||| |||| | ||| ||| | ||| || | | | |
Sbjct 421315 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCG--TATAGGGCTTCGTCATCACGA 421258
Query 105073 ATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCGATGGCATTC 105132
|||||| | |||||| ||||| ||||| |||| || |||||||||
Sbjct 421257 ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTC 421198
Query 105133 AAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA 105167
|| | |||| ||||| |||||| || |||||
Sbjct 421197 AACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTA 421163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935559853020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |