Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq7 268 1e-66
seq5 150 2e-31
>seq7
Length=951660
Score = 268 bits (296), Expect = 1e-66
Identities = 749/1139 (66%), Gaps = 14/1139 (1%)
Strand=Plus/Plus
Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048
Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108
Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000
| | | ||| || | | |||||| ||||| || |||||| ||| || ||
Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166
Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059
|| || |||||| || || || || ||| | ||| | | ||| | ||| |||
Sbjct 337167 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 337225
Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119
||| | || |||| ||||| || ||||| || ||||| || ||| || | ||||
Sbjct 337226 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 337285
Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179
| | | ||| || || || |||||| | | |||| ||| | | ||||| |
Sbjct 337286 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 337345
Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239
| ||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 337346 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 337405
Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299
||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| |
Sbjct 337406 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 337465
Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359
| || || | || || || | | |||||| || ||| | ||| || || |
Sbjct 337466 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 337525
Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419
| || | |||||||| | || ||| || || || || || || || || || ||
Sbjct 337526 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 337585
Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479
| ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| |
Sbjct 337586 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 337645
Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539
| | || || |||||||| || || || || ||| | ||| ||||| || || | |
Sbjct 337646 AAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 337705
Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599
| || ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 337706 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 337765
Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| |
Sbjct 337766 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 337825
Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719
| |||||| || || |||| ||||| | ||| | ||||| | |||| || | |
Sbjct 337826 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 337885
Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776
| || | ||| || | || | ||||| ||||| | || | ||| | || |
Sbjct 337886 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 337942
Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836
| ||||| | || | || || || | ||||| ||| | || | |||| ||||
Sbjct 337943 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 338002
Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896
| | || || | ||| ||||||||||| | | | || ||||| || || || || |
Sbjct 338003 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 338061
Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954
| || ||| | |||| || |||| | || ||||| || || |||||||| | |||
Sbjct 338062 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120
>seq5
Length=1432259
Score = 150 bits (166), Expect = 2e-31
Identities = 573/887 (65%), Gaps = 33/887 (4%)
Strand=Plus/Minus
Query 62453 TTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTC 62512
|||||||| |||||| | ||||| | ||| | | ||||| ||||| || ||||
Sbjct 100441 TTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATAGTTTCAAATATCTGT 100382
Query 62513 TTATTTAGATCTTGC-GCTTCCAGGCTATCAAATGGATAATTTA-AGAGAATAAACGCGT 62570
||||| | || | || || || ||||| || | | || |||| ||||| || |
Sbjct 100381 TTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTACAGAGCATAAAAGCAT 100324
Query 62571 CTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTT 62630
|||| | |||||||||||||||| | | |||| ||||| ||| ||| || |
Sbjct 100323 CTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGATTGCCTCTTTTTGCCT 100264
Query 62631 CTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGA 62690
|||| ||||| ||| || ||||||| || ||| ||||| || || | ||||| |
Sbjct 100263 CTGGGATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCCTAACCAACACTTTAA 100204
Query 62691 CCACATCCTTCAGTTTGAGAAAATCAAATCGCC------CATC------TATT---ACAA 62735
| ||| | || | | ||| |||||| |||| |||| ||
Sbjct 100203 CAACACGATGAAGAGTTACAAAGTCAAATACAGGAGAATCATCAGAAGTTATTTTGACGT 100144
Query 62736 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62795
|||| | ||| || ||||| ||||| || || ||||| || | | ||| |
Sbjct 100143 ACATAGGTAGTGCGACTGATGCAAGATTGCAGACTGCTACTTCCTCTGGTGAACTATACT 100084
Query 62796 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 62855
| || ||| ||||||||| |||| ||| ||||| |||| || || ||
Sbjct 100083 CCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGGTTGGACT 100024
Query 62856 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 62915
| | || || | |||||||||||| ||||| ||| || || || | ||| || ||
Sbjct 100023 TCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGACTTTGTA 99964
Query 62916 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTATCTCTTTTCTCTTTC 62973
||| | ||| | | | || || ||| | ||| | ||| || || || |
Sbjct 99963 GAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAATCAATTCTCGCT--C 99906
Query 62974 GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT---CCAGGACA 63030
|| | ||| | || |||||| | | || | || ||| | || |
Sbjct 99905 ATACTTTTCATATAGGGTTTTGAACTC-TGTACCATAGCA--GTCAGATAAACCTGTTGC 99849
Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090
|||||| |||| | | ||||| ||| | | | | || || | |||||| |||||
Sbjct 99848 TTCATCTGGACTAAAAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATC 99789
Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150
|||||||| | ||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 99788 CGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 99729
Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 99728 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 99671
Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 99670 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGC 99611
Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315
| ||| |||| | |||||| || |||||||| | ||||||||||||
Sbjct 99610 AGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAGATATA 99564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631334686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |