Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7 268 1e-66 seq5 150 2e-31 >seq7 Length=951660 Score = 268 bits (296), Expect = 1e-66 Identities = 749/1139 (66%), Gaps = 14/1139 (1%) Strand=Plus/Plus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 337108 Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 337109 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 337166 Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 || || |||||| || || || || ||| | ||| | | ||| | ||| ||| Sbjct 337167 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 337225 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119 ||| | || |||| ||||| || ||||| || ||||| || ||| || | |||| Sbjct 337226 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 337285 Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179 | | | ||| || || || |||||| | | |||| ||| | | ||||| | Sbjct 337286 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 337345 Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239 | ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 337346 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 337405 Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| | Sbjct 337406 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 337465 Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359 | || || | || || || | | |||||| || ||| | ||| || || | Sbjct 337466 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 337525 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | |||||||| | || ||| || || || || || || || || || || Sbjct 337526 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 337585 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 | ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| | Sbjct 337586 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 337645 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | | || || |||||||| || || || || ||| | ||| ||||| || || | | Sbjct 337646 AAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 337705 Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599 | || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 337706 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 337765 Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| | Sbjct 337766 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 337825 Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719 | |||||| || || |||| ||||| | ||| | ||||| | |||| || | | Sbjct 337826 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 337885 Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776 | || | ||| || | || | ||||| ||||| | || | ||| | || | Sbjct 337886 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 337942 Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836 | ||||| | || | || || || | ||||| ||| | || | |||| |||| Sbjct 337943 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 338002 Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896 | | || || | ||| ||||||||||| | | | || ||||| || || || || | Sbjct 338003 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 338061 Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 | || ||| | |||| || |||| | || ||||| || || |||||||| | ||| Sbjct 338062 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120 >seq5 Length=1432259 Score = 150 bits (166), Expect = 2e-31 Identities = 573/887 (65%), Gaps = 33/887 (4%) Strand=Plus/Minus Query 62453 TTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTC 62512 |||||||| |||||| | ||||| | ||| | | ||||| ||||| || |||| Sbjct 100441 TTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATAGTTTCAAATATCTGT 100382 Query 62513 TTATTTAGATCTTGC-GCTTCCAGGCTATCAAATGGATAATTTA-AGAGAATAAACGCGT 62570 ||||| | || | || || || ||||| || | | || |||| ||||| || | Sbjct 100381 TTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTACAGAGCATAAAAGCAT 100324 Query 62571 CTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTT 62630 |||| | |||||||||||||||| | | |||| ||||| ||| ||| || | Sbjct 100323 CTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGATTGCCTCTTTTTGCCT 100264 Query 62631 CTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGA 62690 |||| ||||| ||| || ||||||| || ||| ||||| || || | ||||| | Sbjct 100263 CTGGGATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCCTAACCAACACTTTAA 100204 Query 62691 CCACATCCTTCAGTTTGAGAAAATCAAATCGCC------CATC------TATT---ACAA 62735 | ||| | || | | ||| |||||| |||| |||| || Sbjct 100203 CAACACGATGAAGAGTTACAAAGTCAAATACAGGAGAATCATCAGAAGTTATTTTGACGT 100144 Query 62736 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62795 |||| | ||| || ||||| ||||| || || ||||| || | | ||| | Sbjct 100143 ACATAGGTAGTGCGACTGATGCAAGATTGCAGACTGCTACTTCCTCTGGTGAACTATACT 100084 Query 62796 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 62855 | || ||| ||||||||| |||| ||| ||||| |||| || || || Sbjct 100083 CCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGGTTGGACT 100024 Query 62856 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 62915 | | || || | |||||||||||| ||||| ||| || || || | ||| || || Sbjct 100023 TCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGACTTTGTA 99964 Query 62916 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTATCTCTTTTCTCTTTC 62973 ||| | ||| | | | || || ||| | ||| | ||| || || || | Sbjct 99963 GAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAATCAATTCTCGCT--C 99906 Query 62974 GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT---CCAGGACA 63030 || | ||| | || |||||| | | || | || ||| | || | Sbjct 99905 ATACTTTTCATATAGGGTTTTGAACTC-TGTACCATAGCA--GTCAGATAAACCTGTTGC 99849 Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090 |||||| |||| | | ||||| ||| | | | | || || | |||||| ||||| Sbjct 99848 TTCATCTGGACTAAAAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATC 99789 Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 |||||||| | ||| ||||| |||| || || ||| || ||||| |||||| Sbjct 99788 CGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 99729 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209 | | || | | ||| | |||||||| |||||| |||||||||||||| || || Sbjct 99728 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 99671 Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268 | ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | | Sbjct 99670 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGC 99611 Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 | ||| |||| | |||||| || |||||||| | |||||||||||| Sbjct 99610 AGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAGATATA 99564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631334686400