Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 201 1e-46 >seq3 Length=1617349 Score = 201 bits (222), Expect = 1e-46 Identities = 598/907 (66%), Gaps = 29/907 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || ||| | ||||| |||||||| || || || | Sbjct 421741 CATGACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGC 421682 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| || || || ||| || || |||| || || ||| | || Sbjct 421681 CAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC 421623 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | |||| || || ||| || || |||||||| | ||| || ||||||||| Sbjct 421622 CTAAAGCAAC-----CAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATC 421568 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 | ||||| || | ||| || |||||||||||| | ||| | ||||| ||||| Sbjct 421567 AGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTTT-TCGATCT 421509 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACA 93076 |||| |||||| | | |||| | || | | ||||| ||| || || | | | | Sbjct 421508 CAACAGCTTCTGTGATGATTCTTTCGAC---AATCTTTGGATCTGGCTTGTTCTTCAA-A 421453 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | || | | | || || ||||||||||| || || ||||| |||| | ||||| || Sbjct 421452 TGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCG 421393 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| || |||||||| | || || ||||| | ||| || || | ||| || Sbjct 421392 TTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAG 421333 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||||| ||||| | |||||||||||| || || || || | | ||| || | Sbjct 421332 GAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGG 421273 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 || | | | |||||| | | ||||| | || |||| || || || | Sbjct 421272 GCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATG 421213 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| || || || || | | | || | || | | ||| ||||| || || || Sbjct 421212 GTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATC 421153 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 |||| ||||| |||| || |||| || ||||| ||||||||| ||||||||||| Sbjct 421152 AACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACAC 421093 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | || ||||| || ||| || | || || | ||||| || || ||| Sbjct 421092 TTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATA 421033 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTT 93555 |||||||| || ||||| || || | | | || || ||| | |||| | || || Sbjct 421032 CCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-GAGATGAAAAATCTCTCGTTCTCGTT 420974 Query 93556 AA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || | ||| || ||||| || || | ||||| |||||| |||||||||| Sbjct 420973 CATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 420914 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || || || ||| | || || ||||| || || || || | ||||| || | || Sbjct 420913 AGAGGCCTCGGCTCTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCAC 420854 Query 93673 AAAACGA 93679 ||||||| Sbjct 420853 AAAACGA 420847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860215296160