Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 9e-22
seq3 109 5e-19
>seq5
Length=1432259
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || |||| ||||| || | || | ||||| ||| | ||
Sbjct 1263876 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1263935
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || ||||||||||| |||||||| || || |||
Sbjct 1263936 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1263995
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || ||| | || | || || ||||||
Sbjct 1263996 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1264055
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | || || || ||| ||||| | || |||
Sbjct 1264056 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 1264103
>seq3
Length=1617349
Score = 109 bits (120), Expect = 5e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || || || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 1563204 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 1563145
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || |||||||||||||| ||||||||||| || |||||| | |
Sbjct 1563144 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 1563085
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 1563084 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 1563025
Query 22407 AGAATCCACCATACATTTAGTTTTGCGA 22434
||||||||| | || || || ||| ||
Sbjct 1563024 GGAATCCACCCTTCACTTGGTCTTGAGA 1562997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727570303460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |