Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 172 2e-37 seq2 158 5e-33 seq5 134 5e-26 seq1 96.9 1e-14 seq6 86.0 2e-11 >seq8 Length=997253 Score = 172 bits (190), Expect = 2e-37 Identities = 831/1304 (64%), Gaps = 43/1304 (3%) Strand=Plus/Plus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || |||||||| || || || | || ||||||||||| |||||||| Sbjct 822686 CAAGTTGAGTACAAAGGTGAGACCAAGGTGTTCACCCCAGAAGAAATTTCCTCTATGGTC 822745 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| ||||| || || ||| | ||| | | || | || || || Sbjct 822746 TTGACCAAGATGAAGGAAACTGCCGAGGCTTATTTGGGTACAACTGTGAAGGACGCTGTC 822805 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || || ||||| ||||| ||| | ||| | || ||||| || ||||| || Sbjct 822806 GTGACCGTGCCAGCTTACTTCAACGATTCGCAAAGACAGGCAACCAAGGATGCTGGTACC 822865 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||||||||| || ||| | |||| ||||| |||||||| || ||||| | || || Sbjct 822866 ATTGCTGGTTTGAACGTTTTGAGAATCATTAACGAACCTACTGCTGCTGCCATTGCCTAC 822925 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || |||| || || | | ||| | || |||| | || ||||| ||||| Sbjct 822926 GGTCTAGATAA---GAAGGGTTCCTCTGAACACAACGTTTTGATTTTCGATTTGGGTGGT 822982 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| ||| |||| | | | || ||||| || | |||||||| ||||| || Sbjct 822983 GGTACTTTCGATGTTTCTTTGTTGACCATCGAAGACGGTATCTTTGAAGTGAAGGCCACT 823042 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAA 451627 |||||||| || | || ||||||||| | ||||| | | ||| | ||| Sbjct 823043 GCCGGTGATACCCACTTGGGTGGTGAAGATTTCGATAACAGATTGGTGAACCACTTGGCC 823102 Query 451628 ACTGATGTTCAACGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTTAGACG 451686 | || ||||| ||| | ||| | || | | | ||||||| | || | ||| | Sbjct 823103 AACGA-ATTCAAGAGAAAGAACAAGAAGGACTTGACCAACAACCAAAGATCATTGAGAAG 823161 Query 451687 TCTTAAAACATCAGCAGAAAAAGCTAAAATTACACT---CAGTTCAACACAAACTACTAG 451743 | | ||| | || |||| |||||| | || | | ||| | ||||| | Sbjct 823162 ATTGAGAACCGCCGCTGAAAGAGCTAAGAGAGCATTGTCCTCTTCCTCTCAAACATC--- 823218 Query 451744 TATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCTAA 451803 ||| | || || ||| | || || | || | | ||| | | ||| | |||| Sbjct 823219 TATCGAAATCGACTCTTTGTTCGAAGGTGTCGACTTTTACACTTCCATCACCAGAGCTAG 823278 Query 451804 ATTTGAATCAATTTGTTCCAGT-ATTTTTGCACGGGTA--ATGAAACCTGTTGATCAAGT 451860 ||| ||| | | ||| || |||| | || || || | || || || | || Sbjct 823279 ATTCGAAGAATTGTGT---GGTGATTTGTTCAGATCTACTTTGGACCCAGTCGAAAAGGT 823335 Query 451861 ATTACATGATTCTAAAATTAGTAAAG-ATAAAATTGATGAAATTGTGCTTGTAGGAGGTT 451919 || || | || || | ||| | ||||||| ||||| || || || || |||| Sbjct 823336 GTTGAGAGACGC-CAAGTTGGACAAGTCTCAAATTGAAGAAATCGTTCTAGTCGGTGGTT 823394 Query 451920 CTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCTTATTTTGGAGGAAAACAA 451975 |||| ||||||| || || ||| | || | | |||||| | | | | || ||| Sbjct 823395 CTACCAGAATTCCAAAGATACAAAAGTTGGTTTCCGACTTCTTCAATGGTAAGGAACCAA 823454 Query 451976 CTATGTAAGAGC-GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGC 452034 ||| | | || || |||||||||||||| || ||||| || || ||||| || Sbjct 823455 -----ACAGATCTATCAACCCAGATGAAGCTGTTGCCTACGGTGCCGCTGTCCAAGCTGC 823509 Query 452035 TATTCTAACAGGT-TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACAC 452093 ||| | || ||| | || | || | |||| | |||| ||||||| || | Sbjct 823510 TATCTTGACCGGTGACCAATCTTCCAAGA-CCCAAGATTTGTTGTTGCTAGATGTCACTC 823568 Query 452094 CTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAA 452153 | | || | || ||||||| |||||||| || ||||| || || ||| | || Sbjct 823569 CATTGTCATTGGGTATTGAAACCGCTGGTGGTATCATGACCAAGTTGATTCCAAGAAACT 823628 Query 452154 CTTCTATTCCTTGTAAAAAG-AGTCAAACATTTAGTACA-----GCAAGTGATAACCAAC 452207 || |||| || | |||| |||| | || | | || ||| || ||||||| Sbjct 823629 CTACTATCCC---AACAAAGAAGTCCGAAATCTTCTCCACTTATGCA---GACAACCAAC 823682 Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAAC 452267 | ||||| ||||||||||||||||| ||| | ||| ||| ||||| || | Sbjct 823683 CTGGTGTGTTGATTCAAGTGTTTGAAGGTGAAAGAACAAAGACCAAGGATAACAACTTGC 823742 Query 452268 TAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAA 452327 |||| | || | || || || || ||||| || || ||||| ||| Sbjct 823743 TAGGTAAGTTCGAATTGTCTGGTATCCCACCAGCTCCAAGAGGTGTCCCACAAATCGAAG 823802 Query 452328 TTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTG 452387 |||| | ||| ||||||| |||||||| | || ||| |||| | ||||| | | Sbjct 823803 TTACATTCGATATTGATGCCAATGGTATCTTGAACGTGTCTGCATTGGAAAAGGGTACCG 823862 Query 452388 GAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTG 452447 | || || || ||||| || || || ||||| | || || || ||||| |||| Sbjct 823863 GTAAGACAAGCAAGATTACCATCACCAACGATAAGGGTAGATTGTCCAAGGAAGAAATTG 823922 Query 452448 AAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 ||| |||||| || || || || ||||||| ||| |||||| Sbjct 823923 AAAGAATGGTTTCCGACGCTGAGAAGTTCAAGGCTGAAGATGAA 823966 >seq2 Length=1792663 Score = 158 bits (174), Expect = 5e-33 Identities = 284/413 (69%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | || ||||| | || || |||||||| || || |||| |||||| Sbjct 1057226 GGTAAGCCACAAATCCAAGTCGAATACAAGGGTGAAACCAAGGTCTTCACTCCAGAAGAA 1057285 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| | | || || ||||| ||||| || ||| || | |||| Sbjct 1057286 ATCTCTTCTATGATCTTGACCAAGATGAAGGAAACTGCTGAATCCTACTTGGGTTGCAAG 1057345 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || |||| ||||| ||||| ||||| ||| | ||| | |||||||| Sbjct 1057346 GTCAACGATGCCGTTGTTACCGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCAACC 1057405 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||||||||||| || ||| | |||| || || ||||| || || Sbjct 1057406 AAGGATGCTGGTACCATTGCTGGTTTGAACGTTTTGAGAATCATCAACGAACCAACCGCC 1057465 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || | ||| || || || || ||||| || |||| | Sbjct 1057466 GCTGCCATTGCTTACGG-TTTGGACAA--GAAGGACGAAGGTGAAAAGAACGTTTTGATC 1057522 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| || ||||| || ||| ||| |||| | | | || ||||| || | || Sbjct 1057523 TTTGACTTGGGTGGTGGTACTTTCGATGTTTCTTTGTTGACCATCGAAGACGGTATCTTC 1057582 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| ||| |||||| ||||| | || ||||||||| | || || Sbjct 1057583 GAAGTTAAGGCTACCGCTGGTGACACTCACTTGGGTGGTGAAGATTTCGACAA 1057635 Score = 102 bits (112), Expect = 3e-16 Identities = 238/356 (67%), Gaps = 6/356 (2%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || |||| || | ||| ||||| | | || ||| | ||| Sbjct 1513094 CTCCAGAAGAAATCTCCGGTATGATTTTGGGTAAGATGAAGCAGATTGCCGAAGAGTATT 1513153 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||||| ||||||| |||| || || || || ||||| ||||| ||| Sbjct 1513154 TGGGCAAGAAGGTTACCCATGCAGTCGTTACCGTGCCAGCATACTTCAACGATGCGCAAA 1513213 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||||||||| || || || ||||||||||| || || | |||| |||| | Sbjct 1513214 GACAAGCAACTAAGGACGCCGGTGCCATTGCTGGTTTGAACATTTTGAGAATCGTTAACG 1513273 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 ||||||| || |||||| | || || || || ||| || | |||| | ||| | Sbjct 1513274 AACCTACCGCCGCTGCTATCGCCTACGG-CTTGGACAA--GACCGAAA---ACGAACACC 1513327 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| || ||||| || || ||| ||| | | || || ||| Sbjct 1513328 AAATCATCGTGTATGACTTGGGTGGTGGTACCTTCGATGTCTCTTTGTTGTCTATCGAAA 1513387 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | || || |||||||| | || || ||||| ||||| | || ||||||||| Sbjct 1513388 ACGGTGTCTTTGAAGTGCAAGCCACTGCCGGTGACACTCACTTGGGTGGTGAAGAT 1513443 >seq5 Length=1432259 Score = 134 bits (148), Expect = 5e-26 Identities = 223/321 (69%), Gaps = 11/321 (3%) Strand=Plus/Minus Query 451288 AGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTT 451347 ||||||| |||| | | | ||||| | | || || ||||||||||| |||||||| Sbjct 580099 AGCAGAAAAATACTTAGATGAGCCAGTAGATAAAGCCGTTATTACTGTTCCTGCTTATTT 580040 Query 451348 CAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCT 451407 ||||||| | || | |||||||| || ||||||||| || || || ||||| ||||| Sbjct 580039 CAATGATTCTCAGAGACAAGCAACAAAGGATGCAGGAACAATGGCGGGGTTAAAGGTTCT 579980 Query 451408 TCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 || | | ||||||||||| || ||||| || | || | | | | Sbjct 579979 CCGTGTGGTAAATGAACCTACTGCTGCTGCATTAAGTTTCGGTTTGG---------ATGC 579929 Query 451468 AACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGT 451527 | | | || | |||| || | |||| |||| || || || ||||| ||| | Sbjct 579928 ACTAAATGATGGTATTATTGCTGTTTATGATCTTGGCGGTGGTACCTTTGATATTTCCAT 579869 Query 451528 ACTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAG 451586 ||| | || |||||||| || ||||| || ||||| |||||||||||||||||||||| Sbjct 579868 -CTTGGATATCGAAGATGGTGTTTTTGAGGTTAAGGCTACCAATGGTGATACTCATCTAG 579810 Query 451587 GAGGTGAAGATATTGATAATG 451607 | || || || ||||||||| Sbjct 579809 GTGGCGAGGACTTTGATAATG 579789 Score = 107 bits (118), Expect = 8e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 ||||||||| || ||||| |||| ||||||| || || ||||| | || || ||||| Sbjct 1319249 AGGTGAAACCAAGACTTTCTCTCCACAAGAAATCTCTTCCATGGTCTTGACCAAGATGAA 1319190 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 |||| || || | |||||| ||| | || || |||| || || || Sbjct 1319189 GGAAATTGCTGAGGCCAAGATTGGTAAGAAGGTTGAAAAGGCTGTCGTTACCGTCCCAGC 1319130 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 || ||||| ||||| ||| | ||||| || || ||||| || ||||||||||| || Sbjct 1319129 ATACTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTGCCATTGCTGGTTTGAA 1319070 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 ||| | ||||||| || |||||||| || ||||| | || || || ||||| Sbjct 1319069 CGTTTTGAGAATTATCAACGAACCTACCGCTGCTGCCATCGCTTACGGTCTAGG 1319016 Score = 96.9 bits (106), Expect = 1e-14 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || ||||||||||| | ||||||||||| |||| ||| || || || || || || Sbjct 119165 GTGAAAACAACAGTTTTAGCAGGCATATTTAGCCCAATAGAGAATGTCTCTGTAGCAAAG 119224 Query 420868 A-AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | || |||||| || || ||| | | |||||||||| || ||||||||||||||| | Sbjct 119225 AGAACCTTTAAAAAACCTTCTTGGA-AGAGAATTTCAATAACTTCTTTTAAAATAGGTAG 119283 Query 420927 TATACCAGAATGATG 420941 | ||| |||||||| Sbjct 119284 AAGACCTGAATGATG 119298 >seq1 Length=1808275 Score = 96.9 bits (106), Expect = 1e-14 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 163279 GAATTAGATAAACCATATGCATCTTTACAAATTGATGGTGGTGAACAAAAAGTTGGAAAT 163338 ||||| || ||||||||| || | |||| ||||| | | | |||| ||||| Sbjct 560083 GAATTTGAAAAACCATATAAATTCTGTGAAATAGATGGAAGGATAGAGCAAGTAGGAAAC 560024 Query 163339 TTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATCCAAAAATAGGAAAA 163398 ||| || |||||||| ||| | || ||| | ||| ||||||| || | || ||| Sbjct 560023 TTTCGTATCGAACCTCCCGGTTTGTTCAGGGGTCGTGGTGCCCATCCTAAGAATGGTAAA 559964 Query 163399 TGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATAAAAATGCACCTATT 163458 | ||||||| | |||| ||||| |||||| || | ||| | || ||||||||||| ||| Sbjct 559963 TTGAAAAGACGTGTATACCCAGAGGATGTTGTTCTTAATCTTGACAAAAATGCACCAATT 559904 Query 163459 CCA 163461 ||| Sbjct 559903 CCA 559901 >seq6 Length=1269051 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 409712 ATTCTTAAAAGCAATAGTTAACCCCGGTGAAATGGTGGGTGTAATTACAGCTCAATCTAT 409771 |||||||| | | ||||| | || ||||| ||||| ||||| | |||| |||||||| Sbjct 1157374 ATTCTTAAGATCTATAGTCCATCCTGGTGAGATGGTTGGTGTTTTAGCAGCACAATCTAT 1157433 Query 409772 TGGAGAACCTGTTACCCAGCTCAATTTAGATTCAAAACACTCTGCAGGTATGGCTAAAGG 409831 ||| ||||||| |||||| | | ||| | || || | ||| ||| |||| Sbjct 1157434 TGGTGAACCTGCTACCCAAATGACCTTAAACACATTCCATTTTGCTGGTGTGGC------ 1157487 Query 409832 AGCTTCTA-AAGCAAAC-TCAGGTGTTCCACGTATTGAAGAAATATTAAATTATAGTAAA 409889 || | | ||| || ||||||||||||||| | | ||||| || ||| |||| Sbjct 1157488 --CTCCAAGAAGGTGACTTCAGGTGTTCCACGTTTAAAGGAAATTTTGAATGTGGCTAAA 1157545 Query 409890 AACATTAAAACACCA 409904 ||||| ||||||||| Sbjct 1157546 AACATGAAAACACCA 1157560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716273633072