Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7 235 6e-57 seq8 102 1e-16 seq3 86.0 7e-12 >seq7 Length=951660 Score = 235 bits (260), Expect = 6e-57 Identities = 1117/1758 (64%), Gaps = 50/1758 (3%) Strand=Plus/Plus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || || |||||||| || || | ||| ||||||| |||| | |||||| |||| | Sbjct 336031 AGGTAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAAC 336090 Query 109471 TTGG--AAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATC 109528 || | ||| | || | | || | ||||| ||| || || |||||||| | Sbjct 336091 TTACCCATAGT-TGGGGCACGA-ATGTGAATGTTCAACGATTGCGATTGATCGATATAAG 336148 Query 109529 GACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGT 109588 | |||| ||||| ||||| ||||| || |||||| |||||||| |||||||||| Sbjct 336149 CAGCACGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGT 336208 Query 109589 ACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC---CAGCCT 109645 | || | || | || | || |||| | |||||| ||||| ||| |||| Sbjct 336209 ATAAGTCTTTTAGCTCTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGA 336268 Query 109646 TCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC--GTCAAC 109703 | | ||| || |||||| ||| ||| | ||| | | | ||| || | | Sbjct 336269 TGAT-ATGGGA--CTTCATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGT-AGC 336324 Query 109704 AAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGT 109763 ||| | |||||| | |||||||||| | || || ||| ||||| | Sbjct 336325 AAG-TAAGGGTTGACGATTTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGA 336383 Query 109764 CGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCAT 109823 ||||| || ||||||||||| |||| || | |||||| | |||||||| || ||||| Sbjct 336384 AGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGAAGCGGTTGGCAT 336443 Query 109824 GGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC--CCGC--TCACGCATTG 109879 ||||| | | | | ||||| ||||| | ||| | | || ||| | || Sbjct 336444 TGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAG--TTA 336501 Query 109880 CGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTA 109939 ||||| || | | | | | |||| ||| ||| | ||| ||| | Sbjct 336502 --TCCCATTCCCATAGGTTAGT---TGGGGTCTTACC---CCATAGATCGAATTGTAACT 336553 Query 109940 CACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACT 109999 ||| |||| || ||||| || |||| || || | || || ||| ||||| | Sbjct 336554 TACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCAATT 336613 Query 110000 CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC 110059 | || || || || |||| || ||||| ||||| || || | |||| Sbjct 336614 CCATGGAGGCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCAATCTCT 336673 Query 110060 GAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAA 110119 | |||||| |||| || || | || | || || | || |||| ||| |||| Sbjct 336674 TTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAACCTTGAA 336733 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAA 110179 |||| | |||| || | ||| ||||||| || | || ||||||||| || || ||| Sbjct 336734 CACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTGGATAAT 336793 Query 110180 AGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTT 110239 |||| ||||| |||| | || | || |||| | ||| | ||| || || | | Sbjct 336794 AGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGTGCAACT 336853 Query 110240 TGTCGTAATCGAACGTTTTCGTCT--CCTTATTGACATATTTG----------GGGAGAG 110287 | | | | | | | |||| |||| || | | |||||| || | || Sbjct 336854 TCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTGGCAAAG 336913 Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347 | ||||| || | || || |||| || || ||| || | |||||| | ||||| Sbjct 336914 CGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCAC 336973 Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 ||||||||| ||| ||| || |||||||||||| ||||| || ||| || | Sbjct 336974 AACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAG 337033 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||||| || |||||| |||||||||||||||| || || | | | || || | || Sbjct 337034 CATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACC 337093 Query 110468 ATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | | | || |||||| || | | ||||| |||||| ||||| Sbjct 337094 ACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACA 337153 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 | | |||||||| | ||||| ||||| | | || || | || ||| |||| | Sbjct 337154 ATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACA 337213 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | | || ||| || ||||||||||| || || || ||||| | || | Sbjct 337214 AAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTG 337273 Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707 ||| | ||| | ||| ||||| | ||| ||||| | | || | |||| Sbjct 337274 GGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGT 337333 Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGAC 110761 | | |||||| ||||||||||| |||| || | |||| || || ||| || Sbjct 337334 CGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTAC 337393 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 ||| |||| ||| || || || ||| ||||| || | | ||| |||||||| | Sbjct 337394 CACCT---TGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 337450 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || ||| || ||||| ||| || | | |||||||| ||| || | Sbjct 337451 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 337510 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 ||| |||||||||||| || |||| || ||||| || | | || | |||| Sbjct 337511 GCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAA 337570 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| ||||| |||||| |||| |||| | ||| || || || ||||| || ||| ||| Sbjct 337571 TACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAG 337630 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061 | || || |||||||| ||||| || | || || |||| | | | ||||| || Sbjct 337631 GAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGT 337690 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 |||| || || | | | |||| ||||||| ||||| | || |||| ||||| Sbjct 337691 TGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGA 337750 Query 111122 ACATATATTGAGG-CGTT 111138 ||| | |||||| |||| Sbjct 337751 TCATGTGTTGAGGACGTT 337768 >seq8 Length=997253 Score = 102 bits (112), Expect = 1e-16 Identities = 313/479 (65%), Gaps = 4/479 (1%) Strand=Plus/Plus Query 167302 CGCTTGATATTCTCCTTGATATCGTCAGGGTTAAATGGGGGGATGTAGCAACTGAAACCC 167361 ||||||| ||| | ||||| |||| || ||||| || |||| | ||| |||| Sbjct 514864 CGCTTGACATTGTTGACAATATCTACAGGATTGAATGGCGGAATGTTGGTACTCCAACCA 514923 Query 167362 GTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAGTCG 167421 || |||||||||||| ||| || ||||||| ||| || | |||| ||| | || Sbjct 514924 GTCCCAATACCTTCACAACCATTGACCAAAATCATAGGAATTACAGGCAAGTACCATTCA 514983 Query 167422 GGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTGGGATC 167480 ||||||| | | |||| || | | ||| ||| | ||||| ||| ||| | | Sbjct 514984 GGTTCAACTGTTTGTTCATCGTCTTGAATGTAGGTTAATAATGG-ATCGTCTAGAGAGTT 515042 Query 167481 GAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCATC 167540 |||| |||| || ||| |||||| || ||||| || |||| || | ||| Sbjct 515043 AAAGATTTTTCTAGTGATCTTATTAAGCTCTGTGAAGATATATCTCGGAGCAGCTGAATC 515102 Query 167541 CTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGC-TCGAGAAGATTGATGTTAT 167599 || ||||| | | ||||| || |||| ||| || | ||| | || || | Sbjct 515103 TTTACCACCAGTAGCTCTGGTACCGAAAGCACCATTAGGCTTCAACAAG-TAAATATTGT 515161 Query 167600 TCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGT 167659 | || || | |||| | ||| || || ||||||| | |||||| |||| |||| Sbjct 515162 TAGAACCAACAAAATCTTGGGCTAAACCAACAATCGTTTGATATAGGGAAGCTTCACCGT 515221 Query 167660 GGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCATCTT 167719 | ||||| | | | ||||| ||||| | | | || |||||||| || || || Sbjct 515222 GATGGTATCCGGTATGTTCAGAAACATAACCACCTAGTTGAGCAACCTTGATTTCTGATT 515281 Query 167720 TGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATCT 167778 | | ||| | | ||||| | ||| |||||||| | |||| |||||| | |||||| Sbjct 515282 TTAAATTTCTCTTAAAACAGGCATAGATAACCTTTCTTTGACCAGGTTTTAACCCATCT 515340 >seq3 Length=1617349 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| ||| ||||||||||||||||| || ||||| | | || |||||||||||| Sbjct 421722 TAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATA 421663 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || || ||| || ||| | ||| ||| | ||| || | Sbjct 421662 AAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTT-ACCTAAAGCAACCAGTAGTCT 421604 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| | |||| |||| | |||| || | |||||||| | ||| | | Sbjct 421603 GTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA-GAAA 421545 Query 119387 CGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGAT 119440 |||| ||||| |||| || | | |||| |||||||| ||||||||| | | ||| Sbjct 421544 CGGGTAGAGCGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT 421490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975381575200