Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 179 4e-40
seq5 145 9e-30
>seq7
Length=951660
Score = 179 bits (198), Expect = 4e-40
Identities = 598/927 (65%), Gaps = 6/927 (1%)
Strand=Plus/Plus
Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939
|| ||||| || | ||||| ||||| || | ||| |||| |||| | ||||||
Sbjct 336913 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 336972
Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999
||| | || | | |||||||||||||| || | |||||| | ||||||||
Sbjct 336973 CAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAA 337032
Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059
|| |||||||| ||||| || || || |||||||| | |||| ||| | ||||| | |
Sbjct 337033 GCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTAC 337092
Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTAT 48117
|| | | |||||| | | |||| | || ||||| || |||
Sbjct 337093 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTAC 337152
Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177
| |||| ||||||||| || || |||| ||| || || ||| || ||| | |
Sbjct 337153 AATGCTTC--AAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGA 337210
Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237
||| | |||||| || | || | ||||| |||| || | |||||| ||||| || |
Sbjct 337211 ACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTG 337270
Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297
|| || || || || | | | |||||| || || ||| || | | || | |
Sbjct 337271 CTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGA 337330
Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357
|||| | ||||| | |||||||| || | || | || | |||| |||| || |
Sbjct 337331 AGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGT 337390
Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417
|||| ||||| || | || | ||||| ||||| |||| | | |||||| | |||||
Sbjct 337391 TACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 337450
Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476
| || || |||| || || || | ||| ||| || ||| | || || ||| |
Sbjct 337451 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 337510
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
| || ||| |||||||| || | ||||| || | ||||| || | || || |||
Sbjct 337511 GCAA-ACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 337569
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| ||||| || ||| || |||| | ||| ||||| |||||||| ||||||
Sbjct 337570 ATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 337629
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
||| || | ||| || | |||||| || || || | || || | || | |
Sbjct 337630 GGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGG 337689
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716
|| || ||||| | ||| || ||||| | || ||||| | || || | |||
Sbjct 337690 TTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATG 337749
Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776
| ||| | |||||| | |||| ||| || || ||| | | | || || ||||
Sbjct 337750 ATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCC 337809
Query 48777 AATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || || ||||| || |||||| ||
Sbjct 337810 AAGGTCTTGAAACCGAAGTAGTTGAAT 337836
>seq5
Length=1432259
Score = 145 bits (160), Expect = 9e-30
Identities = 341/509 (67%), Gaps = 12/509 (2%)
Strand=Plus/Minus
Query 48183 GACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA 48242
|||||||| |||| |||| || | |||||| | ||| || ||||| | ||| |
Sbjct 99829 GACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAA 99770
Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302
||||| || | | || | |||||| || || |||| || | |||| | |||||
Sbjct 99769 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCA 99710
Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362
|| ||||| ||||||||||||| || ||||| | |||| || ||||| || ||
Sbjct 99709 ATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCA 99650
Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422
|||||||| | ||||||||| || |||||| |||| | | ||| || || | ||||||
Sbjct 99649 CCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTA 99590
Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT--ACTAATTGAAA 48480
|| ||||||| | || || |||||| ||| | || |||||||| || || |
Sbjct 99589 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTTGACACAT--GTA 99532
Query 48481 TACCTATACCACC---TGCCATTTTAGATATTAGAGCACAC-CGTTTAAGGGTATCATAA 48536
| || |||||||| |||| || ||||| | |||| | || ||| || | ||||
Sbjct 99531 TTCCAATACCACCGGATGCC---TTTGATATCAAAGCAGTCTTGTGTAA-AGTCTTATAA 99476
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| || || ||| || ||| |||| | ||||| || |||| | |||
Sbjct 99475 ATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTT 99416
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
|| || ||| || || || || || || |||||||| | || | ||| | |||
Sbjct 99415 ACTGTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAAT 99356
Query 48657 TTATATGTTTCAATAACAGAATCTATATC 48685
| || || |||| || | |||||||||
Sbjct 99355 TGGTAAGTCTCAAGTACTGCATCTATATC 99327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108209785760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |