Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 161 5e-35 seq7 150 9e-32 >seq5 Length=1432259 Score = 161 bits (178), Expect = 5e-35 Identities = 185/248 (75%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 25901 AAATG--CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTG 25958 ||||| |||||| |||| | ||||| || |||||| | ||| |||||||| | | Sbjct 99834 AAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATCCGGAATCCATAAAG 99775 Query 25959 CATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGA 26018 |||||||||| |||| || ||||||||||||||||||||||||||| |||| | ||||| Sbjct 99774 CATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGA 99715 Query 26019 AATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTC 26078 | |||| |||||| ||||||||||| || || ||| ||| ||| | ||| Sbjct 99714 AGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGT 99655 Query 26079 CTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATC 26138 ||||||||||| || ||||| || || | || ||||| || ||| |||||||| | Sbjct 99654 TCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAAC 99595 Query 26139 CAGTTGAA 26146 || | ||| Sbjct 99594 CATTAGAA 99587 Score = 125 bits (138), Expect = 4e-24 Identities = 363/544 (67%), Gaps = 21/544 (4%) Strand=Plus/Minus Query 24648 TATTTTCTTTTTCTAATGTAAATTGCTTAGCT-GATACTGCTGGTTTAGTTCTAAGATAA 24706 ||||||| | | || |||||||| |||| || | |||| | ||||||||||||| Sbjct 101079 TATTTTCATCATTCAAAGTAAATTGTATAGCACGAGAA-GCTGCCTGAGTTCTAAGATAA 101021 Query 24707 TACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766 ||||| || || |||||| ||||||||| | ||||| |||||||||||||||||| | Sbjct 101020 TACATCCCTGTCTTCAATCCCTTCTTCCATGCATAAAAGTGCATTGATGTTAGTTTTCCC 100961 Query 24767 AT-GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 || ||| | | | | ||| ||||||| | || |||| || || || | ||| Sbjct 100960 ATAGTTGGTTCACGC-AAATACAAGTTTAGAGACTGAGACTGATCAATGAATGGAGCTCT 100902 Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTAT-CTCT 24884 |||| | | || || | |||| || || || || | ||||||||| || Sbjct 100901 ATCTCTGGAGAGATCGATCAATTTTTTTTGAGAAATTTCCCAAACAGTTTTGTATAAACT 100842 Query 24885 CTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAG-A 24943 | || ||||| || | || |||| ||||| || ||||| ||| | ||| | Sbjct 100841 C-TTCATCTCCTCCGGCACACCATCAATGGATTGAATGGAACCATTATCTTT---TAGAA 100786 Query 24944 TTCAATCTCATA---TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGT 25000 ||| || | || || || |||| | || ||||| || ||| || || | | Sbjct 100785 TTCTATTTTTTAGCTTTTCGT-TCCATACTTTCATTTTACAAAAATCATCAACCATATAT 100727 Query 25001 TTATTTATGATAATAAATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTGA 25058 | ||| | ||| ||||||||||||| | || || || || |||| || || || | Sbjct 100726 TGATTGACGATTGTAAATTCTCCAGATAGCACCCTCCTGGAATAGATA--TTAGAGGTCA 100669 Query 25059 ATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATG 25118 ||||| || |||| | || || ||||||||||| || || ||||||||| Sbjct 100668 TAGGTTCGAACGATTCGGTGAAACCCAATATTTGAGAAGTTGAGGCAGTTGGCATTGGAC 100609 Query 25119 CTATTAATAGCGAATTTCTCAAACCA---TATTTAACAATCTCTTGTTTTAATTTATCCC 25175 | | ||| || ||||| ||||||||| ||| ||| | ||| ||||| |||||| Sbjct 100608 CAACTAAAAGTGAATTCCTCAAACCAGGCCCATTAGTAATTTTTTGCTTTAAGGTATCCC 100549 Query 25176 AATC 25179 |||| Sbjct 100548 AATC 100545 >seq7 Length=951660 Score = 150 bits (166), Expect = 9e-32 Identities = 323/478 (68%), Gaps = 6/478 (1%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||| |||| ||| |||||| | || | ||| ||| ||| ||| || | |||||| Sbjct 337201 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 337260 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||| | ||| || || ||||| || | |||||||| || ||||| |||||| | Sbjct 337261 ATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTG 337320 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 | || | ||| || || ||||||||||||||||| || | || | || || ||| Sbjct 337321 ATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCA 337380 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 ||| || |||||||| || ||||| | ||||| | |||||||| | |||| Sbjct 337381 GGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATT 337440 Query 26129 GGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| |||| | ||| ||| ||||| || | | ||| | || || || || | ||| Sbjct 337441 GGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAAT 337499 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAA 26245 | |||| || | ||| || |||||||| || || || ||||| || | || Sbjct 337500 GTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAA 337559 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 | || ||| |||| |||| ||| ||| | ||||| | | || ||||| || || Sbjct 337560 A--GTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGAC 337617 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363 | ||| | ||||| || || | ||| || | ||| || | ||| || || | |||| Sbjct 337618 ATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATC 337675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039740950300