Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq5 120 5e-22
>seq3
Length=1617349
Score = 129 bits (142), Expect = 1e-24
Identities = 163/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||||||||| |||| || || || || | || | || || || || ||
Sbjct 1562980 ATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAG 1563039
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || |||| |||||||| ||||||||||| || ||||| ||||||||
Sbjct 1563040 TCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 1563099
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 1563100 GGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 1563159
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 1563160 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1563203
>seq5
Length=1432259
Score = 120 bits (132), Expect = 5e-22
Identities = 168/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || | |||| || || || ||
Sbjct 1264111 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTG 1264052
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 1264051 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 1263992
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || || ||||| || ||||| || ||| || ||||| || || || ||
Sbjct 1263991 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAA 1263932
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| | ||||| || |||||||||| || || | ||| || |||||
Sbjct 1263931 GATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1263876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135049607200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |