Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7 161 3e-34
seq5 114 4e-20
seq6 104 7e-17
seq8 93.3 1e-13
>seq7
Length=951660
Score = 161 bits (178), Expect = 3e-34
Identities = 343/509 (67%), Gaps = 5/509 (1%)
Strand=Plus/Plus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
|||||| | |||| || || |||| |||||| ||||| || || || || ||
Sbjct 337353 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 337412
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
|||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 337413 AGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 337472
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | ||||| | || |||| || ||||| || | ||||||||||| |
Sbjct 337473 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 337532
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
||||| || || |||||||| | ||| | | ||||||||||||| ||||| || |
Sbjct 337533 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 337592
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
||| | | ||| | || || | ||| || | || || ||||| ||||| |||||
Sbjct 337593 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 337652
Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381
|| | || || | || || |||| |||||| | ||| || ||| || ||| |
Sbjct 337653 TGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 337711
Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441
||| || ||||| |||| || || || ||||| ||| || |||||||| ||
Sbjct 337712 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 337771
Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
||| | || | |||| || | ||| | ||||||| || || || ||||| || |
Sbjct 337772 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 337831
Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530
|| | ||||| | || ||| |||||
Sbjct 337832 TGAATTGGAAATCTCTGTCGTAGACAATC 337860
Score = 109 bits (120), Expect = 2e-18
Identities = 333/502 (66%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| || || ||||||| | | ||||| || || | | ||| | ||| ||||| |
Sbjct 641059 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 641000
Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967
|| | |||||||| ||| || | | | || |||||||| ||||| |||||
Sbjct 640999 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 640942
Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024
| | || ||| |||||||| |||| ||||| ||| | |||| || ||| |||
Sbjct 640941 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 640885
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082
||||||| |||||| |||||||| | ||| || | || | || ||| || ||
Sbjct 640884 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 640827
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | || || || | |||||||| || |||| ||||||| ||||||||||||||||
Sbjct 640826 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 640767
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
||| | || || | |||| ||| |||||| || || ||| | || | |
Sbjct 640766 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 640707
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
|| |||||||| || ||||| || ||| | | || |||| | || || ||||
Sbjct 640706 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 640647
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| || || ||||| || ||| ||| || | || | |||| || ||| |||||
Sbjct 640646 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 640588
Query 289322 CCTCATCACATCCTGCTACATC 289343
| |||| ||| ||||| |||||
Sbjct 640587 CTTCATTACAACCTGCCACATC 640566
Score = 96.9 bits (106), Expect = 1e-14
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
||||| |||| ||||| || || || || | || |||||| || || |||||
Sbjct 336916 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 336975
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|||| ||| ||| |||||| || || || ||||| || ||| || |||||||||||
Sbjct 336976 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 337035
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| ||| ||||||| || || || | || || ||||
Sbjct 337036 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 337081
>seq5
Length=1432259
Score = 114 bits (126), Expect = 4e-20
Identities = 310/468 (66%), Gaps = 11/468 (2%)
Strand=Plus/Minus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
||||||| |||||| | ||| ||| | |||||| || | ||| | ||| |
Sbjct 99808 ACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATT 99749
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | ||||||||||| | ||| | |||||| || |||||| ||| |||
Sbjct 99748 TCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGT 99689
Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086
|||| || ||| ||| |||| | ||| ||||| ||||| ||||| | ||
Sbjct 99688 TCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCT 99629
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || || || || | |||||||||| | |||||| ||||| ||||| | ||
Sbjct 99628 GTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAG 99569
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTT 156205
|||| | |||| || | | ||| ||| | ||||| |||||||||||| || ||
Sbjct 99568 ATATAAGCACCATTTGCCCTTATATT-TGACACATGTATTCCAATACCACCGGATGCCTT 99510
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || ||| | | || ||| || ||||||| |||||||| || ||||||||
Sbjct 99509 TGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCAT 99450
Query 156266 TGATAGTAGATAGCACGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
| | ||| |||| || || | ||||| | || | || ||||| | ||
Sbjct 99449 AGCCACAAGAAAGCATGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGT 99393
Query 156323 AGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC 156370
||||| || |||||||||||||| | ||||| | | ||| |||||
Sbjct 99392 AGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTC 99345
>seq6
Length=1269051
Score = 104 bits (114), Expect = 7e-17
Identities = 222/327 (68%), Gaps = 6/327 (2%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || |||||| ||||| | | |||| ||||||||| || ||||| || ||
Sbjct 1156777 ATCGTAATGAACCATAATATCTTCTAAAGCTTTGACTAAACGACGTTGGATATACCCGGT 1156718
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | |||||| ||||| ||||| || | ||| ||||||||||||| |||||||| ||
Sbjct 1156717 TTCTGCTGTTTTCACAGCAGTATCGATCAAACCTTCACGACCACCCATCGCATGGAAAAA 1156658
Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| || | | || | ||| || ||| | ||||||||||| | || |
Sbjct 1156657 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 1156599
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || | ||| ||| | || ||||| ||||| | | || | ||| | | ||||
Sbjct 1156598 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 1156539
Query 302792 GCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATC 302849
|||| || || || || || || | || | | ||| || | ||| || ||||
Sbjct 1156538 GCTTACCTTCCACCGATTGTTGACCAACACAGGCAGACATTTGGGCAATGTTAATAAAGG 1156479
Query 302850 ACTGCCCTTGGAGCCAGCATTTACCAT 302876
| ||||| ||||| ||| | |||||
Sbjct 1156478 A--ACCCTTTGAGCCTGCACTGACCAT 1156454
>seq8
Length=997253
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199
|||||| ||||| ||||||| |||| || || ||||| || | ||| || ||
Sbjct 515073 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 515130
Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259
|| || |||| || | | ||| |||||||| || || |||| ||| || | ||||
Sbjct 515131 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 515190
Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319
||||| | || || |||||||||||||| ||||| | |||||| ||||||||
Sbjct 515191 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGGTATCCGGTATGTTCAGAAACATAA 515250
Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366
|||| | ||| || || || ||||| || | | ||| |||| ||
Sbjct 515251 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 515297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816015956308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |