Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq5 125 6e-24 seq3 122 7e-23 >seq5 Length=1432259 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| ||||| || ||||| ||||| ||||| || || | Sbjct 1264102 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1264043 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 1264042 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1263983 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | ||||| ||| ||| ||| Sbjct 1263982 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 1263923 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || ||||| || ||||||| ||| || || || || ||||| Sbjct 1263922 TCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1263876 >seq3 Length=1617349 Score = 122 bits (134), Expect = 7e-23 Identities = 160/217 (74%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| |||||||| ||||| ||||| || || | | || | | || || Sbjct 1563004 ACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCC 1563063 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | ||||||||||| || || || |||||||| || |||||||| Sbjct 1563064 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG- 1563122 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | |||||| | || | ||||||||| ||| ||||| | ||| || || || Sbjct 1563123 AATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTT 1563182 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 ||||| ||||| || || | | ||| |||||||| Sbjct 1563183 ACCAGTCAAGGTCTTGACGA--AACTG--TTTTAAAA 1563215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218805631844