Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 3e-22
>seq3
Length=1617349
Score = 120 bits (132), Expect = 3e-22
Identities = 296/436 (68%), Gaps = 15/436 (3%)
Strand=Plus/Plus
Query 50280 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50339
|| ||| | || || ||||| || || |||||||||||||| || ||| ||| ||
Sbjct 421280 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 421339
Query 50340 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50399
||||| || | | || | || | ||||| || | || || ||||| |||
Sbjct 421340 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 421399
Query 50400 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50459
|||| | || ||||| ||||||| |||||||| |||||| | | || | |
Sbjct 421400 ATTTGCAGAGATGAAGGCTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 421456
Query 50460 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50517
|| ||| || || | ||| | | | | | || ||| |||||| || || ||||
Sbjct 421457 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 421514
Query 50518 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50576
|||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || ||
Sbjct 421515 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 421573
Query 50577 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50634
||| | | ||| | || ||||||||||||||| | | ||||| || |||| ||
Sbjct 421574 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 421631
Query 50635 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50693
||||||| || | ||| |||||| || |||||| | ||||| || |||| || |||
Sbjct 421632 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 421690
Query 50694 ACAAACTTTTTCGAAA 50709
|| || || |||||||
Sbjct 421691 ACCAATTTCTTCGAAA 421706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543487028800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |