Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 3e-32
seq7 122 2e-22
seq4 105 2e-17
seq8 93.3 1e-13
seq6 86.0 1e-11
>seq5
Length=1432259
Score = 154 bits (170), Expect = 3e-32
Identities = 328/484 (68%), Gaps = 7/484 (1%)
Strand=Plus/Plus
Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573
||| | || ||||||||| | | || | || || |||||||| ||||||||| | ||
Sbjct 99426 TTGTCATCATGCTTTCTTGTGGCTATGGAAGAAGACTCTATTGATGGTATTTATAAGACT 99485
Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGT-TCATG 110631
||| | || |||||| | || || || || || || ||||| || || || |||
Sbjct 99486 -TTACACAAGACTGCTTTGATATCAAAGGCATCCGGTGGTATTGGAATACATGTGTCAA- 99543
Query 110632 ATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTC 110691
|||| | |||| || || ||||| || |||| ||| |||| | ||| | ||||
Sbjct 99544 ATATAAGGGCAAATGGTGCTTATATCTCAGGGTCGAATGGTACTTCTAATGGTTTAGTTC 99603
Query 110692 CAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA-- 110749
| ||| | | || || ||| |||| || | |||||| |||||||||| || | |
Sbjct 99604 CTATGCTGCGGGTTTTTAACAACACAGCCAGATATGTCGATCAAGGTGGGAACAAACGCC 99663
Query 110750 -TGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAAC 110808
||| | ||| ||| || | ||||| |||||| ||||| |||| |||||| |||
Sbjct 99664 CTGGTGCCTTTTGTATATACTTGGAACCATGGCATGGGGATATTATTGACTTCTTACAAC 99723
Query 110809 TTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGA 110868
| | || ||||| ||| |||||| || || || || ||||||||||| | ||||
Sbjct 99724 TAAGAAAGAATCACGGAAAAGAAGAAATGAGGGCCCGAGACTTATTTTATGCTTTATGGA 99783
Query 110869 TTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTC 110928
|| | ||| | || ||| | |||||| || | |||| ||||| || | ||||
Sbjct 99784 TTCCGGATCTTTTTATGCAGCGTGTTGAAAACAATGAAGATTGGTCCATTTTTAGTCCAG 99843
Query 110929 ATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAAT 110988
|| | | ||| ||||||| ||||| | |||||| || ||| || ||||| |
Sbjct 99844 ATGAAGCAACAGGTTTATCTGACTGCTATGGTACAGAGTTCAAAACCCTATATGAAAAGT 99903
Query 110989 ATGA 110992
||||
Sbjct 99904 ATGA 99907
>seq7
Length=951660
Score = 122 bits (134), Expect = 2e-22
Identities = 383/590 (65%), Gaps = 5/590 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| || |||||||| || | |||||| |||| || || | |||| || || |
Sbjct 337831 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 337772
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||||||||||||||||| | | | || || | ||||| || || ||||||
Sbjct 337771 CTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 337712
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480
|| ||| | ||| ||| | || | | || || | | | || ||| | ||
Sbjct 337711 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCA 337653
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | |||| || | || || || || | | ||
Sbjct 337652 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 337593
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| || ||||| |||||||||||||| || || | || ||| ||| | || |||||
Sbjct 337592 AAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 337533
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | |||| || |||||| | ||| |||| | ||||| || | || | | || ||
Sbjct 337532 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 337473
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||| | || || |||||||| | | || |||||| |||||||
Sbjct 337472 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCT 337413
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| ||| | || || | || |||| ||
Sbjct 337412 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 337353
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| |||||||| || || ||| | || | | || || || || ||||||
Sbjct 337352 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 337293
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAA 110887
| ||| | || || || ||| | ||||| ||||| | ||||||||
Sbjct 337292 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAA 337243
>seq4
Length=1474618
Score = 105 bits (116), Expect = 2e-17
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 167642 ATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACC 167701
|||||||||| | ||||||||||| || || |||| ||| ||||| || ||||| ||
Sbjct 1393862 ATCGATGAAAGTCTTCCAGATTTTGATATTACACCGTCTTTTACATTCGTCATAAAAGCC 1393921
Query 167702 ATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNN 167761
|| |||| | | || ||||||||| ||||| ||||| || | || | ||| | |
Sbjct 1393922 GTAAACTCTCGTAACATTAGCACATTCATGATTCCCTCTCAAAAGAAAAAAGTTCTCTGG 1393981
Query 167762 NNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATC 167821
| || |||| | | || ||||||||| ||||||| |||||||||
Sbjct 1393982 ATATTTGATCTTATAACAAAGAAGAAGCAGAATTGTTTCCAATGATTGCTTACCTCTATC 1394041
Query 167822 AACATAATCACCTAAAAATATATATTT 167848
|| || ||||||||||||| ||| ||
Sbjct 1394042 CACGTAGTCACCTAAAAATAGATAATT 1394068
>seq8
Length=997253
Score = 93.3 bits (102), Expect = 1e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
||||||||| || | ||||| || |||||| || | ||| |||| | |||
Sbjct 515357 TCTATTCCTTCCGTATTAGATGGGTTAAAACCTGGTCAAAGAAAGGTTATCTATGCCTGT 515298
Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976
|| || ||||| || | ||||| |||||||| ||| ||||||||||| |||
Sbjct 515297 TTTAAGAGAAATTTAAAATCAGAAATCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAA 515238
Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033
||| | || || |||||||||||||| || || |||| | ||||| ||| | |||
Sbjct 515237 CATACCGGATACCATCACGGTGAAGCTTCCCTATATCAAA---CGATTGTTGGTTTAGCC 515181
Query 280034 CAAGATTTTATGGCTTCAAACAA 280056
||||||||| | | ||| |||||
Sbjct 515180 CAAGATTTTGTTGGTTCTAACAA 515158
>seq6
Length=1269051
Score = 86.0 bits (94), Expect = 1e-11
Identities = 125/173 (72%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 305317 TGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGC 305376
||| |||||| ||| | |||||| | |||||||| || || || ||||||||||||||
Sbjct 1155529 TGATAATGATCCCGTTTTATTCAATCGTCAACCATCCCTTCACAAGATGTCTATGATGGC 1155588
Query 305377 TCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACG 305434
|| | ||| || | |||| | | ||| || || | ||||| | || | |
Sbjct 1155589 ACACAGAGTTAAGG--TTATGCCGTATTCTACCTTCAGGCTAAATTTGTCTGTTACATCC 1155646
Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||||||| |||||||| || || ||||||||| | || || || |||||
Sbjct 1155647 CCTTATAATGCAGATTTTGACGGTGACGAAATGAATTTACACGTTCCACAATC 1155699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811522692724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |