Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7 269 4e-67 seq3 226 4e-54 seq5 129 8e-25 >seq7 Length=951660 Score = 269 bits (298), Expect = 4e-67 Identities = 1370/2153 (64%), Gaps = 53/2153 (2%) Strand=Plus/Plus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | || ||||| || | | ||||| | || || | ||| |||||||||| Sbjct 335984 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATAC 336043 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || |||| ||| ||||||||||||||||||| || | || | ||| Sbjct 336044 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 336103 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | | || ||||| |||| |||||| ||||||||| |||| | | || || | Sbjct 336104 GGGCACGAATGTGAATGTTCAACGATTGCGATTGATCGATATAAGCAGCACGGTCAGCGG 336163 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | ||||| |||||| | |||||||||| |||||| | | | ||| | | Sbjct 336164 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCT 336223 Query 68603 CATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 | | ||| | | | | ||||| || || ||| ||| | || || ||| | Sbjct 336224 CTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCA 336283 Query 68660 TCTCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 | | |||| ||| ||| | || ||| | | || | | || || || ||| Sbjct 336284 TAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATT 336342 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| ||||||||||| | ||||| ||| || || || ||||| || | | | Sbjct 336343 TGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACAC 336402 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 || || | |||| ||||| | || || || |||||||| || || | ||| ||| Sbjct 336403 TCGTTGTAACCCAAGATTTGGGATGTGGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAG 336462 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 ||||| ||||| ||| |||||| | | || | | | ||| ||||| || | || | Sbjct 336463 TTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTT 336522 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || | ||| |||||| |||||| | || | | ||| || || | Sbjct 336523 GGGGTCTTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAA 336582 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 | |||||| || ||||| | | || | ||| || || | ||||| | || Sbjct 336583 GATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAG 336642 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCT-TGTGCTTCTAGACTATCGAATGGATAATG 69077 || ||||| || || | || | |||| | ||||||| | || ||||| || | Sbjct 336643 ATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACG 336701 Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCT 69136 || | || || || || || || || ||||| |||||| | ||||||||||||||| Sbjct 336702 TAGCATCATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCA-ATAGGTCTATGTCTCA 336760 Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 | ||||| ||| ||| | || |||||||| ||| || || ||| | || | | Sbjct 336761 TGTTTGATCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGT 336820 Query 69197 TTCG-GACTACTACTT-----TAAC---CACGTCCTTTAGTTTGAGAAAATCAAATCGT- 69246 | || | | | ||| || | || | ||| | ||| | | | || | Sbjct 336821 TGCGAGTCAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGT-AGGTTTGAGTCTTA 336879 Query 69247 CCATC------TATAACAA---ACATATTCAGTGCTACAGATGCTAGATTACAAACTGCT 69297 ||||| ||| ||| || || || | ||| || | |||||||| || Sbjct 336880 CCATCGTTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCG 336939 Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357 || | | || | |||| | || || ||| | || | | |||||||| Sbjct 336940 GTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTA 336999 Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417 |||| || | ||||||||||| |||||||| || |||||||| || || || || ||| Sbjct 337000 CCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTA 337059 Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACGG 69475 |||||||| | |||| ||| | |||| | ||| | || | ||| || | | | Sbjct 337060 CCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGA---CAG 337114 Query 69476 TCTTG-TA--ACG--CTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCT 69528 |||| || ||| ||||||| | | || || ||| | || ||| |||||||| Sbjct 337115 TCTTTCTACCACGGCCTTCTCTCT--CGTAACGTTCGTACAATGC--TTCAAATTCATCA 337170 Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588 || ||||||| || || || ||| |||||| | | ||| | ||| | || | Sbjct 337171 CCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTC 337230 Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648 | || |||| ||||| || ||||| || ||||| || ||| || | ||||| | Sbjct 337231 TTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCA 337290 Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708 | ||||||| || || || ||| | | |||| || || | ||||| || ||| Sbjct 337291 CGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGC 337350 Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768 ||||| || | || | || | | | || |||| || || || || || || | ||| Sbjct 337351 CATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAA 337410 Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828 | |||||||| || | || | | ||| ||||||||||| ||||| |||| || || Sbjct 337411 CGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTA 337470 Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888 |||| ||| ||| || | | ||||| || ||| | ||| || || || || Sbjct 337471 CCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCG 337530 Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 | |||||||| | ||||| ||||| ||||| || ||||| || ||| ||| || Sbjct 337531 GTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCC 337590 Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008 ||||| | || ||||| |||||||| |||| ||| || ||||| || | | Sbjct 337591 TTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGT 337650 Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068 || || || ||||| ||||| || || ||| | || ||||| ||||| | | | | Sbjct 337651 GTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTT 337710 Query 70069 TCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 || ||||| | || | || || || | || || | ||| | ||| || ||||| ||||| Sbjct 337711 TCAATATCTCTACCG-TGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTC 337769 Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 | ||| || ||| | | || ||| || ||||| || || || || || || Sbjct 337770 AGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTA 337829 Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGT 70247 |||| || || ||||| ||||| | ||| |||| || | |||| || | | | Sbjct 337830 GTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCAT 337889 Query 70248 AACTATATCCATA-ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAA 70306 || || | |||| || | || || || || || | ||||| | || || || | Sbjct 337890 GACGATGT-CATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGA 337948 Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 | | || | || ||||| | || | ||| | || | |||| |||||| || | Sbjct 337949 CCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGT 338008 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA- 70425 | || ||||| ||||| || || | | |||| || || || || || || || ||| Sbjct 338009 TAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAG 338067 Query 70426 GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 || | |||| ||||| || |||||||||| | ||| || || || | ||| Sbjct 338068 GCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120 >seq3 Length=1617349 Score = 226 bits (250), Expect = 4e-54 Identities = 592/885 (67%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || || ||||| | || || | ||| || ||||| | | Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| |||||||||||||| | |||| ||||||| ||| ||||| || | || Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549 Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 ||| |||||||| || | | | | ||||||| |||| || || || ||||| || || Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTTTT-CGATCTCAACAGCTTCTGTGATGAT 421490 Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | || | || | || | | | | | ||||| | || | || ||||| | Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 421431 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 |||| || | ||| |||||||| | ||| |||||||| || || || | || |||| Sbjct 421430 AGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 421371 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | | ||| ||| || | ||| || |||||||| || || ||||| || || | |||| Sbjct 421370 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 421311 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTATGTATCCA- 39798 | || || || || ||||| | ||| || |||| ||| |||| | | ||||| Sbjct 421310 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCG-TCATCACGAATCCAT 421252 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGA 39857 || || ||||| | ||| || |||||| | || || ||||| || ||||| || | Sbjct 421251 CTAATG-GCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA 421194 Query 39858 GATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 | | | ||| | | ||| || | || || || || |||| ||| |||| | Sbjct 421193 AGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGG 421134 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 | ||||||||||| ||| || || || ||||| ||||| | ||||| | |||||| | Sbjct 421133 AGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCA 421074 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 |||| | | | || ||||| |||| ||||| ||||| || ||||| ||| ||||| | Sbjct 421073 CCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGA 421014 Query 40038 ATGCCAATACATGTTTA-ATAAAATATTTTTC-ATCGGGTGTCAAT---TTATTCCAGTC 40092 | || | || | | | || ||| || | || || || ||| | || |||||||| Sbjct 421013 ACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGT-TCATTCTGTTGTTCCAGTC 420956 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 || | ||| || || | ||| | ||||||||| |||||||| || ||||| || | || Sbjct 420955 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 420896 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || | ||| || || | || | ||||| |||| ||||| Sbjct 420895 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851 >seq5 Length=1432259 Score = 129 bits (142), Expect = 8e-25 Identities = 200/286 (70%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 ||||| ||||| | | ||||| | |||| | | ||| || | |||||| ||||| Sbjct 99848 TTCATCTGGACTAAAAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATC 99789 Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt 69674 |||||||| | ||| ||| | |||| || || ||||||| ||||| ||| || Sbjct 99788 CGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 99729 Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGAC 69734 | | || | | || || |||||||| |||||||||||| | ||||| | | | Sbjct 99728 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGC 99669 Query 69735 TCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAG 69794 || || ||||| || || || ||||| | |||||||| ||||| ||| | || | ||| Sbjct 99668 ACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGCAG 99609 Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||| |||| | ||||||||| ||||||| | || || |||||| Sbjct 99608 CATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAGATATAA 99563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908078745760