Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 269 4e-67
seq3 226 4e-54
seq5 129 8e-25
>seq7
Length=951660
Score = 269 bits (298), Expect = 4e-67
Identities = 1370/2153 (64%), Gaps = 53/2153 (2%)
Strand=Plus/Plus
Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422
|||| || | || ||||| || | | ||||| | || || | ||| ||||||||||
Sbjct 335984 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATAC 336043
Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482
| || |||| ||| ||||||||||||||||||| || | || | |||
Sbjct 336044 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 336103
Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542
| | || ||||| |||| |||||| ||||||||| |||| | | || || |
Sbjct 336104 GGGCACGAATGTGAATGTTCAACGATTGCGATTGATCGATATAAGCAGCACGGTCAGCGG 336163
Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602
|||| | ||||| |||||| | |||||||||| |||||| | | | ||| | |
Sbjct 336164 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCT 336223
Query 68603 CATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659
| | ||| | | | | ||||| || || ||| ||| | || || ||| |
Sbjct 336224 CTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCA 336283
Query 68660 TCTCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718
| | |||| ||| ||| | || ||| | | || | | || || || |||
Sbjct 336284 TAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATT 336342
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|| ||||| ||||||||||| | ||||| ||| || || || ||||| || | | |
Sbjct 336343 TGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACAC 336402
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
|| || | |||| ||||| | || || || |||||||| || || | ||| |||
Sbjct 336403 TCGTTGTAACCCAAGATTTGGGATGTGGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAG 336462
Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898
||||| ||||| ||| |||||| | | || | | | ||| ||||| || | || |
Sbjct 336463 TTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTT 336522
Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958
|| | ||| |||||| |||||| | || | | ||| || || |
Sbjct 336523 GGGGTCTTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAA 336582
Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018
| |||||| || ||||| | | || | ||| || || | ||||| | ||
Sbjct 336583 GATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAG 336642
Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCT-TGTGCTTCTAGACTATCGAATGGATAATG 69077
|| ||||| || || | || | |||| | ||||||| | || ||||| || |
Sbjct 336643 ATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACG 336701
Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCT 69136
|| | || || || || || || || ||||| |||||| | |||||||||||||||
Sbjct 336702 TAGCATCATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCA-ATAGGTCTATGTCTCA 336760
Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196
| ||||| ||| ||| | || |||||||| ||| || || ||| | || | |
Sbjct 336761 TGTTTGATCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGT 336820
Query 69197 TTCG-GACTACTACTT-----TAAC---CACGTCCTTTAGTTTGAGAAAATCAAATCGT- 69246
| || | | | ||| || | || | ||| | ||| | | | || |
Sbjct 336821 TGCGAGTCAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGT-AGGTTTGAGTCTTA 336879
Query 69247 CCATC------TATAACAA---ACATATTCAGTGCTACAGATGCTAGATTACAAACTGCT 69297
||||| ||| ||| || || || | ||| || | |||||||| ||
Sbjct 336880 CCATCGTTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCG 336939
Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357
|| | | || | |||| | || || ||| | || | | ||||||||
Sbjct 336940 GTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTA 336999
Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417
|||| || | ||||||||||| |||||||| || |||||||| || || || || |||
Sbjct 337000 CCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTA 337059
Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACGG 69475
|||||||| | |||| ||| | |||| | ||| | || | ||| || | | |
Sbjct 337060 CCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGA---CAG 337114
Query 69476 TCTTG-TA--ACG--CTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCT 69528
|||| || ||| ||||||| | | || || ||| | || ||| ||||||||
Sbjct 337115 TCTTTCTACCACGGCCTTCTCTCT--CGTAACGTTCGTACAATGC--TTCAAATTCATCA 337170
Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588
|| ||||||| || || || ||| |||||| | | ||| | ||| | || |
Sbjct 337171 CCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTC 337230
Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648
| || |||| ||||| || ||||| || ||||| || ||| || | ||||| |
Sbjct 337231 TTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCA 337290
Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708
| ||||||| || || || ||| | | |||| || || | ||||| || |||
Sbjct 337291 CGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGC 337350
Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768
||||| || | || | || | | | || |||| || || || || || || | |||
Sbjct 337351 CATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAA 337410
Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828
| |||||||| || | || | | ||| ||||||||||| ||||| |||| || ||
Sbjct 337411 CGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTA 337470
Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888
|||| ||| ||| || | | ||||| || ||| | ||| || || || ||
Sbjct 337471 CCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCG 337530
Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948
| |||||||| | ||||| ||||| ||||| || ||||| || ||| ||| ||
Sbjct 337531 GTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCC 337590
Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008
||||| | || ||||| |||||||| |||| ||| || ||||| || | |
Sbjct 337591 TTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGT 337650
Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068
|| || || ||||| ||||| || || ||| | || ||||| ||||| | | | |
Sbjct 337651 GTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTT 337710
Query 70069 TCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|| ||||| | || | || || || | || || | ||| | ||| || ||||| |||||
Sbjct 337711 TCAATATCTCTACCG-TGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTC 337769
Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187
| ||| || ||| | | || ||| || ||||| || || || || || ||
Sbjct 337770 AGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTA 337829
Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGT 70247
|||| || || ||||| ||||| | ||| |||| || | |||| || | | |
Sbjct 337830 GTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCAT 337889
Query 70248 AACTATATCCATA-ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAA 70306
|| || | |||| || | || || || || || | ||||| | || || || |
Sbjct 337890 GACGATGT-CATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGA 337948
Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366
| | || | || ||||| | || | ||| | || | |||| |||||| || |
Sbjct 337949 CCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGT 338008
Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA- 70425
| || ||||| ||||| || || | | |||| || || || || || || || |||
Sbjct 338009 TAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAG 338067
Query 70426 GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478
|| | |||| ||||| || |||||||||| | ||| || || || | |||
Sbjct 338068 GCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120
>seq3
Length=1617349
Score = 226 bits (250), Expect = 4e-54
Identities = 592/885 (67%), Gaps = 20/885 (2%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| || || | || ||||| ||||| ||||| || |||| || || |||
Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| || || || || ||||| | || || | ||| || ||||| | |
Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||| |||||||||||||| | |||| ||||||| ||| ||||| || | ||
Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549
Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
||| |||||||| || | | | | ||||||| |||| || || || ||||| || ||
Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTTTT-CGATCTCAACAGCTTCTGTGATGAT 421490
Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
| || | || | || | | | | | ||||| | || | || ||||| |
Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 421431
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
|||| || | ||| |||||||| | ||| |||||||| || || || | || ||||
Sbjct 421430 AGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 421371
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
| | ||| ||| || | ||| || |||||||| || || ||||| || || | ||||
Sbjct 421370 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 421311
Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTATGTATCCA- 39798
| || || || || ||||| | ||| || |||| ||| |||| | | |||||
Sbjct 421310 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCG-TCATCACGAATCCAT 421252
Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGA 39857
|| || ||||| | ||| || |||||| | || || ||||| || ||||| || |
Sbjct 421251 CTAATG-GCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA 421194
Query 39858 GATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917
| | | ||| | | ||| || | || || || || |||| ||| |||| |
Sbjct 421193 AGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGG 421134
Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977
| ||||||||||| ||| || || || ||||| ||||| | ||||| | |||||| |
Sbjct 421133 AGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCA 421074
Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037
|||| | | | || ||||| |||| ||||| ||||| || ||||| ||| ||||| |
Sbjct 421073 CCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGA 421014
Query 40038 ATGCCAATACATGTTTA-ATAAAATATTTTTC-ATCGGGTGTCAAT---TTATTCCAGTC 40092
| || | || | | | || ||| || | || || || ||| | || ||||||||
Sbjct 421013 ACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGT-TCATTCTGTTGTTCCAGTC 420956
Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152
|| | ||| || || | ||| | ||||||||| |||||||| || ||||| || | ||
Sbjct 420955 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 420896
Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|| | ||| || || | || | ||||| |||| |||||
Sbjct 420895 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851
>seq5
Length=1432259
Score = 129 bits (142), Expect = 8e-25
Identities = 200/286 (70%), Gaps = 0/286 (0%)
Strand=Plus/Minus
Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614
||||| ||||| | | ||||| | |||| | | ||| || | |||||| |||||
Sbjct 99848 TTCATCTGGACTAAAAATGGACCAATCTTCATTGTTTTCAACACGCTGCATAAAAAGATC 99789
Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt 69674
|||||||| | ||| ||| | |||| || || ||||||| ||||| ||| ||
Sbjct 99788 CGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 99729
Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGAC 69734
| | || | | || || |||||||| |||||||||||| | ||||| | | |
Sbjct 99728 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGC 99669
Query 69735 TCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAG 69794
|| || ||||| || || || ||||| | |||||||| ||||| ||| | || | |||
Sbjct 99668 ACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTGGCTGTGTTGTTAAAAACCCGCAG 99609
Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||| |||| | ||||||||| ||||||| | || || ||||||
Sbjct 99608 CATAGGAACTAAACCATTAGAAGTACCATTCGACCCTGAGATATAA 99563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908078745760
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