Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 1e-31
>seq3
Length=1617349
Score = 150 bits (166), Expect = 1e-31
Identities = 325/476 (68%), Gaps = 14/476 (3%)
Strand=Plus/Plus
Query 19314 TGTCATTAAACAATTGGGATGTAA-ACATGTTCGTGGACTTTTGCTTTATGGGCCACCGG 19372
||||||| || | ||||| | || ||| || || || ||| | | ||| || || |
Sbjct 1198573 TGTCATTGAAAAGTTGGG-TATATCACACGTAAAGGGTCTCTTGTTGTTTGGTCCTCCAG 1198631
Query 19373 GTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCA 19432
|| ||| ||||||||||| || ||| || | ||| | | | | | ||| |||
Sbjct 1198632 GTACTGGTAAAACATTAATCGCAAGAAAAATCGGTACAATGTTGA-ATGCCAAAGAGCCA 1198690
Query 19433 AA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTA 19491
|| ||||| || ||||| ||||| | | ||||||||| || || ||||||||| |
Sbjct 1198691 AAGATTGTTAACGGTCCAGAAATTCTCAGTAAATATGTGGGCTCTTCAGAAGAAAATATC 1198750
Query 19492 CGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAG-TTCTTT 19550
|| ||||| || ||||| | |||| | || | |||| | | || ||| ||
Sbjct 1198751 CGTAACTTGTTCAAGGATGCTGAGGCAGAATATAAT-GCCAAGGGTGAAGAATCTTCATT 1198809
Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC---TGGT-- 19605
||||||||| || | ||||||||||| | | | |||||||||||||| |||
Sbjct 1198810 GCACATTATCATTTTCGATGAATTGGATTCTGTATTCAAGCAAAGAGGTTCAAGAGGTGA 1198869
Query 19606 --GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTA 19663
||| | || || |||| ||| || || ||| | || | || | || ||||||
Sbjct 1198870 CGGTACA-GGCGTTGGAGACAATGTGGTTAACCAATTGCTTGCTAAGATGGATGGTGTTG 1198928
Query 19664 ACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCG 19723
||||| | || ||||| || |||||||| ||||||||| | ||| || || || || |
Sbjct 1198929 ACCAATTAAACAATATATTGGTTATTGGTATGACTAATCGTAAGGATTTGATTGATAGTG 1198988
Query 19724 CCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779
|||| ||||| || ||| | || ||| | || |||||||| | ||||| || |||
Sbjct 1198989 CCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTCGAAATTCAATTACCAGACGAA 1199044
Score = 113 bits (124), Expect = 4e-20
Identities = 559/866 (65%), Gaps = 38/866 (4%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| | || || | ||| |||| || |||||
Sbjct 420859 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 420918
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825
||| || |||||| | |||||| | || || ||| || | |||| || | || |
Sbjct 420919 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 420974
Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880
| |||| | | ||||| |||| | | | ||||| |||||||| ||| || |
Sbjct 420975 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 421034
Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
| || || ||||| ||||| || | || || ||| | |||||||| |
Sbjct 421035 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 421094
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || |||||| || ||||| || || || |||| || | |||
Sbjct 421095 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 421154
Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
| || || |||||||| ||| || || || | || ||||| ||||| || |||
Sbjct 421155 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 421210
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116
|| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 421211 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 421270
Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||| || | || ||||| || | |||||||| | || || || ||
Sbjct 421271 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 421330
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| || || ||||| || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 421331 TCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 421390
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || || || | | ||||||||||| || ||| ||||| || ||| || || |
Sbjct 421391 AACGAATTGATTTGCAGAGATGAAGGCTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 421449
Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349
| | | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 421450 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 421503
Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407
|| |||| ||| |||| || | | | || || |||| || | || | || |||
Sbjct 421504 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 421561
Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 421562 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 421621
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| |||
Sbjct 421622 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 421681
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| || || || |||||
Sbjct 421682 GCCGGTAAAACCAATTTCTTCGAAAA 421707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455593104420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |