Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 150 1e-31 >seq3 Length=1617349 Score = 150 bits (166), Expect = 1e-31 Identities = 325/476 (68%), Gaps = 14/476 (3%) Strand=Plus/Plus Query 19314 TGTCATTAAACAATTGGGATGTAA-ACATGTTCGTGGACTTTTGCTTTATGGGCCACCGG 19372 ||||||| || | ||||| | || ||| || || || ||| | | ||| || || | Sbjct 1198573 TGTCATTGAAAAGTTGGG-TATATCACACGTAAAGGGTCTCTTGTTGTTTGGTCCTCCAG 1198631 Query 19373 GTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCA 19432 || ||| ||||||||||| || ||| || | ||| | | | | | ||| ||| Sbjct 1198632 GTACTGGTAAAACATTAATCGCAAGAAAAATCGGTACAATGTTGA-ATGCCAAAGAGCCA 1198690 Query 19433 AA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTA 19491 || ||||| || ||||| ||||| | | ||||||||| || || ||||||||| | Sbjct 1198691 AAGATTGTTAACGGTCCAGAAATTCTCAGTAAATATGTGGGCTCTTCAGAAGAAAATATC 1198750 Query 19492 CGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAG-TTCTTT 19550 || ||||| || ||||| | |||| | || | |||| | | || ||| || Sbjct 1198751 CGTAACTTGTTCAAGGATGCTGAGGCAGAATATAAT-GCCAAGGGTGAAGAATCTTCATT 1198809 Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC---TGGT-- 19605 ||||||||| || | ||||||||||| | | | |||||||||||||| ||| Sbjct 1198810 GCACATTATCATTTTCGATGAATTGGATTCTGTATTCAAGCAAAGAGGTTCAAGAGGTGA 1198869 Query 19606 --GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTA 19663 ||| | || || |||| ||| || || ||| | || | || | || |||||| Sbjct 1198870 CGGTACA-GGCGTTGGAGACAATGTGGTTAACCAATTGCTTGCTAAGATGGATGGTGTTG 1198928 Query 19664 ACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCG 19723 ||||| | || ||||| || |||||||| ||||||||| | ||| || || || || | Sbjct 1198929 ACCAATTAAACAATATATTGGTTATTGGTATGACTAATCGTAAGGATTTGATTGATAGTG 1198988 Query 19724 CCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779 |||| ||||| || ||| | || ||| | || |||||||| | ||||| || ||| Sbjct 1198989 CCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTCGAAATTCAATTACCAGACGAA 1199044 Score = 113 bits (124), Expect = 4e-20 Identities = 559/866 (65%), Gaps = 38/866 (4%) Strand=Plus/Plus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || || || || ||| | || || | ||| |||| || ||||| Sbjct 420859 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 420918 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825 ||| || |||||| | |||||| | || || ||| || | |||| || | || | Sbjct 420919 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 420974 Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880 | |||| | | ||||| |||| | | | ||||| |||||||| ||| || | Sbjct 420975 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 421034 Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 | || || ||||| ||||| || | || || ||| | |||||||| | Sbjct 421035 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 421094 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || |||||| || ||||| || || || |||| || | ||| Sbjct 421095 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 421154 Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 | || || |||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 421155 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 421210 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 || | || || ||| | || || | |||||| ||| |||||| | | || Sbjct 421211 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 421270 Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| || | || ||||| || | |||||||| | || || || || Sbjct 421271 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 421330 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || || || ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 421331 TCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 421390 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 || || || || | | ||||||||||| || ||| ||||| || ||| || || | Sbjct 421391 AACGAATTGATTTGCAGAGATGAAGGCTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 421449 Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349 | | | ||| | ||||| | || |||| | | ||| || | ||| || Sbjct 421450 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 421503 Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407 || |||| ||| |||| || | | | || || |||| || | || | || ||| Sbjct 421504 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 421561 Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467 || | ||||||||||||||| | |||| ||||||| | |||| | | | Sbjct 421562 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 421621 Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527 ||| | | ||| |||| | || ||||| || || ||||||||||| ||||| ||| Sbjct 421622 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 421681 Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553 | || ||||| || || || ||||| Sbjct 421682 GCCGGTAAAACCAATTTCTTCGAAAA 421707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455593104420