Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq7 165 9e-36 seq3 84.2 2e-11 >seq7 Length=951660 Score = 165 bits (182), Expect = 9e-36 Identities = 463/700 (66%), Gaps = 8/700 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || ||||| | || ||||| || ||||| ||||||| || ||||| Sbjct 337700 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCAACACTTTTCAAT 337641 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| || || ||||| || ||||| ||||| |||||||| || || Sbjct 337640 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 337581 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || ||||| || | ||||| |||||| ||||| ||| | |||||| Sbjct 337580 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 337521 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | ||| | | ||| | || || || ||||| Sbjct 337520 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 337462 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || || | || ||| | || || ||||||||||| || || ||||| | Sbjct 337461 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCTCGTTACGTTGA 337402 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | || Sbjct 337401 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 337342 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 || | || || |||| | | ||| || ||| | ||||| || || ||| | | Sbjct 337341 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 337283 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| |||| || ||||| || || || |||||| | | || |||||| |||| | Sbjct 337282 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 337223 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | | || ||||| || ||| | | | ||| |||||||| || | Sbjct 337222 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 337163 Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || | | |||| || ||| |||| | ||||| | |||| |||||||| Sbjct 337162 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 337104 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898 | || | ||| | || ||| | | ||| || || || || || || | |||| Sbjct 337103 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 337045 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||||||| | ||| ||||||| || || |||||| Sbjct 337044 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 337005 >seq3 Length=1617349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| ||||||||||||||| |||||||| || || || | | || Sbjct 421435 GGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 421376 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || |||||||||||| ||||||||| |||||||||| ||| || | Sbjct 421375 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 421316 Query 74870 GCCTTCGAC 74878 ||||| || Sbjct 421315 ACCTTCCAC 421307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215425423200