Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq7 165 9e-36
seq3 84.2 2e-11
>seq7
Length=951660
Score = 165 bits (182), Expect = 9e-36
Identities = 463/700 (66%), Gaps = 8/700 (1%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|| || ||| || ||||| | || ||||| || ||||| ||||||| || |||||
Sbjct 337700 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCAACACTTTTCAAT 337641
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|||||||| ||| || || ||||| || ||||| ||||| |||||||| || ||
Sbjct 337640 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 337581
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || || ||||| || | ||||| |||||| ||||| ||| | ||||||
Sbjct 337580 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 337521
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| | ||| | | | ||| | ||| | | ||| | || || || |||||
Sbjct 337520 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 337462
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || || | || ||| | || || ||||||||||| || || ||||| |
Sbjct 337461 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCTCGTTACGTTGA 337402
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | ||
Sbjct 337401 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 337342
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660
|| | || || |||| | | ||| || ||| | ||||| || || ||| | |
Sbjct 337341 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 337283
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
|| |||| |||| || ||||| || || || |||||| | | || |||||| |||| |
Sbjct 337282 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 337223
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
| ||| || | | || ||||| || ||| | | | ||| |||||||| || |
Sbjct 337222 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 337163
Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
|| | | |||| || ||| |||| | ||||| | |||| ||||||||
Sbjct 337162 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 337104
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898
| || | ||| | || ||| | | ||| || || || || || || | ||||
Sbjct 337103 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 337045
Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||||| | ||| ||||||| || || ||||||
Sbjct 337044 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 337005
>seq3
Length=1617349
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| ||||||||||||||| |||||||| || || || | | ||
Sbjct 421435 GGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 421376
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || |||||||||||| ||||||||| |||||||||| ||| || |
Sbjct 421375 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 421316
Query 74870 GCCTTCGAC 74878
||||| ||
Sbjct 421315 ACCTTCCAC 421307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215425423200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |