Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq5 129 1e-24 seq3 129 1e-24 >seq5 Length=1432259 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||| || || || ||||||||||| || || | | || || || Sbjct 1264091 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1264032 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | ||||||||| ||||||| |||||||| Sbjct 1264031 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 1263972 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || |||||||| || ||| || || | || || Sbjct 1263971 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 1263912 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | ||||| Sbjct 1263911 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1263876 >seq3 Length=1617349 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | ||| | |||||| ||||| || ||||||||||| || || | | || || Sbjct 1562995 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1563054 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| || || ||||| | | ||||||||| || |||| |||||| Sbjct 1563055 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1563114 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || ||||| || || || || ||||||||||| ||| || || | |||| Sbjct 1563115 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1563174 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || | ||||| || || Sbjct 1563175 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1563203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150752462660