Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3 170 5e-37
seq5 165 2e-35
seq84 95.1 3e-14
seq7 91.5 4e-13
>seq3
Length=1617349
Score = 170 bits (188), Expect = 5e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| ||| | ||| || |||||||| ||||||| ||||| || | |||||||||
Sbjct 1562995 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1563054
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||
Sbjct 1563055 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1563114
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| ||| ||| || |||||||| || | ||| || || || |||
Sbjct 1563115 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1563174
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| ||||| || ||||| || || | |||
Sbjct 1563175 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1563203
>seq5
Length=1432259
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| ||||||| ||||| || | ||||||||| ||
Sbjct 1264091 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1264032
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 1264031 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 1263972
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || || ||
Sbjct 1263971 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 1263912
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | || || | ||| | ||||||
Sbjct 1263911 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1263876
>seq84
Length=35908
Score = 95.1 bits (104), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 7498 ATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557
||||| || ||||| ||||||||||| ||| |||| |||| |||||| ||| |
Sbjct 5837 ATTATTAGATTAGAGTTAGCTGCTCCCGGTAATCAAGTATTAGCCGGTAATCATCAATTA 5896
Query 7558 TACAACGT--TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615
| || || || || || ||| |||| | | ||||||||||| || || ||||| |
Sbjct 5897 TTTAATGTCTTAGTAGTAGGGC--ATGCAGTATTGATGATTTTCTTCTTAGTAATGCCTG 5954
Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675
| || || ||||| || || | || | ||||||||||||||||| | ||||||
Sbjct 5955 CATTAATTGGAGGTTTTGGTAACTATTTATTACCTTTAATGATTGGTGCATCAGATATGT 6014
Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725
||||| | || | || ||||| || |||| |||| ||| | |||
Sbjct 6015 CTTTTGCTAGATTAAATAATATTTCATTCTGATGTTTACCACCTGCTTTA 6064
>seq7
Length=951660
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || || || |||||||| |||||||||||
Sbjct 272217 GAAAATTTGACCATCGGTAATGGAAATAACGTTGGTTGGAATATAAGCGGAAACATCACC 272158
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||||| || || || || || | || ||||||||
Sbjct 272157 ACCTTGGGTTTCGATGACTGGCAAAGCGGTCAAAGAACCACCACC 272113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529916538296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |