Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 212 5e-50 >seq3 Length=1617349 Score = 212 bits (234), Expect = 5e-50 Identities = 571/854 (67%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||||||||||||| ||||| || | || Sbjct 421737 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 421678 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366 ||||| ||||||||||| || || || ||||| ||||||| | ||| || || || Sbjct 421677 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC-CTAA 421619 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | || ||| || |||||||| | || ||| |||| | || ||| || Sbjct 421618 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 421559 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAA-AAACTCTTGTTCTATAGTTACGGCTT 4485 || | || || ||||| |||| | || | ||||| ||| || || |||| Sbjct 421558 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 421500 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATT-TACTAAGTATCCAAACA 4542 ||||||| || || ||| |||||| || ||| || || | | || || || | Sbjct 421499 CTGTGATGAT-TC-TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGAT-GGAATA 421443 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||||| ||||| || ||||| ||||| ||||||| ||||| |||||| || || | Sbjct 421442 GCAAACAGGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 421383 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| ||||| |||| || | ||| || || || || || || ||||| | Sbjct 421382 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 421323 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 | || | ||||| ||||| || ||||| || |||| || | || ||||| || Sbjct 421322 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 421266 Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 | | ||||||| | | ||||| | ||| |||| || | ||||| || | | Sbjct 421265 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 421206 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || || || | ||| || || | || |||||||| || | | Sbjct 421205 TGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACG 421146 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| |||| || || || ||||| || ||| || || ||||| || || | |||| Sbjct 421145 AATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 421086 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||| || || | | || |||| || ||||||||||| || ||||| || Sbjct 421085 CTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGG 421026 Query 4960 TGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGT 5015 || ||||| ||||| | | | ||||| | ||| || |||| || | | Sbjct 421025 AAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTG 420967 Query 5016 TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075 || ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || Sbjct 420966 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCC 420907 Query 5076 TCCGCTTTTTTGTA 5089 || ||| | || || Sbjct 420906 TCGGCTCTCTTATA 420893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049162807972