Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq3 212 5e-50
>seq3
Length=1617349
Score = 212 bits (234), Expect = 5e-50
Identities = 571/854 (67%), Gaps = 21/854 (2%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||||||||||||| ||||| || | ||
Sbjct 421737 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 421678
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366
||||| ||||||||||| || || || ||||| ||||||| | ||| || || ||
Sbjct 421677 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC-CTAA 421619
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || || | || ||| || |||||||| | || ||| |||| | || ||| ||
Sbjct 421618 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 421559
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAA-AAACTCTTGTTCTATAGTTACGGCTT 4485
|| | || || ||||| |||| | || | ||||| ||| || || ||||
Sbjct 421558 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 421500
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATT-TACTAAGTATCCAAACA 4542
||||||| || || ||| |||||| || ||| || || | | || || || |
Sbjct 421499 CTGTGATGAT-TC-TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGAT-GGAATA 421443
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
||||| ||||| || ||||| ||||| ||||||| ||||| |||||| || || |
Sbjct 421442 GCAAACAGGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 421383
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| || || ||||| ||||| |||| || | ||| || || || || || || ||||| |
Sbjct 421382 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 421323
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722
| || | ||||| ||||| || ||||| || |||| || | || ||||| ||
Sbjct 421322 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 421266
Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779
| | ||||||| | | ||||| | ||| |||| || | ||||| || | |
Sbjct 421265 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 421206
Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
| || || || || | ||| || || | || |||||||| || | |
Sbjct 421205 TGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACG 421146
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
||| |||| || || || ||||| || ||| || || ||||| || || | ||||
Sbjct 421145 AATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 421086
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
||| | ||| || || | | || |||| || ||||||||||| || ||||| ||
Sbjct 421085 CTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGG 421026
Query 4960 TGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGT 5015
|| ||||| ||||| | | | ||||| | ||| || |||| || | |
Sbjct 421025 AAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTG 420967
Query 5016 TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075
|| ||||||| | | ||| || | ||||| | ||||||| |||||||||| || ||
Sbjct 420966 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCC 420907
Query 5076 TCCGCTTTTTTGTA 5089
|| ||| | || ||
Sbjct 420906 TCGGCTCTCTTATA 420893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049162807972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |