Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 304 2e-77 seq3 212 9e-50 seq5 147 3e-30 >seq7 Length=951660 Score = 304 bits (336), Expect = 2e-77 Identities = 1365/2143 (64%), Gaps = 46/2143 (2%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || ||||| || | | |||||| | || || | ||| |||||||||||||| | Sbjct 335990 CAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATACCAGTCT 336049 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||||||||||||||||||| |||| || | | || | Sbjct 336050 TCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGGGCAC 336109 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| ||| || ||||||||| |||| | | ||||| ||||| | Sbjct 336110 GAATGTGAATGTTCAACGATTGCGATTGATCGATATAAGCAGCACGGTCAGCGGCCATAT 336169 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 |||||| |||||| | |||||||||| ||| ||| | | | ||| | || | || Sbjct 336170 CGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCTCTTGTG 336229 Query 77017 GAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| ||||| || |||||| ||| | || || ||| ||| | | Sbjct 336230 GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCATAGCTT 336289 Query 77074 CATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || || ||| | | || | | ||| || || ||||| ||| Sbjct 336290 CATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAAT 336348 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || ||||| || || | ||||| ||| || || || ||||| || | | | || ||| Sbjct 336349 TCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTG 336408 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | ||||| ||||| | || ||||| |||||||| || || | ||| ||| ||||| Sbjct 336409 TAACCCAAGATTTGGGATGTGGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTT 336468 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 ||||| ||| |||||| | | || | | | ||| ||||| || | | || Sbjct 336469 AGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTC 336528 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | |||| |||||| |||||| | || | | || || || | | |||| Sbjct 336529 TTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCA 336588 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || || |||||| | || | ||| ||||| | || || | || || ||| Sbjct 336589 TATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAGATAGTT 336648 Query 77433 TCGAAAATCTTCTTATTGAGATCT-TGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || || | || | |||| | |||||| | ||||| || || ||| | Sbjct 336649 TCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCAT 336707 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || || || ||||| || ||||| || | ||||||||||||||||| | || || Sbjct 336708 CATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGA 336767 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 || |||| | || |||||||| ||| ||| || ||| | || | || | | Sbjct 336768 TCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGT 336827 Query 77612 AACTACTTTAA----------CCACGTCCTTTAGTTTAAGAAAATCAAATCTT-CCATC- 77659 | || ||| | || || | |||| || | | |||| ||||| Sbjct 336828 CAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGTAGGT--TTGAGTCTTACCATCG 336885 Query 77660 -----TATAACAAACAT-GTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||| | | | |||||| ||||| || | |||||||| || || Sbjct 336886 TTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCT 336945 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| | |||| | || || ||| | || | | |||||||| |||| Sbjct 336946 TCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAG 337005 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || ||||| || || || | ||||| || || || || || || || ||| Sbjct 337006 TTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTT 337065 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT 77889 || | || | ||| | |||| | ||| | ||| | ||| || | | ||| | Sbjct 337066 TCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGACAGTC--TTTCT 337121 Query 77890 ATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | | |||| ||||| || || | ||| | || |||||||||||| || |||| Sbjct 337122 ACCACGGCCT-TCTCTCTCGTAACGTTCGTACAATGC--TTCAAATTCATCACCGTAAAC 337178 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 ||| || || || ||| ||||| | | ||| | ||| || | | | || || Sbjct 337179 ATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGAC 337238 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || ||||| || |||||||| || || | |||| | | ||| Sbjct 337239 TCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTC 337298 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 337299 TTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTC 337358 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||||| || ||||| || || || | || | || || Sbjct 337359 GATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGT 337418 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | | ||||||||||||||||||||| || || || || |||| ||| Sbjct 337419 GTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAAT 337478 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 ||| || | | ||||| || |||| | || || || || || ||||||| Sbjct 337479 GTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGA 337538 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 || | || || ||||| || ||||| ||||| || || || ||| ||||| Sbjct 337539 GATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGC 337598 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | || ||||| |||||||| ||||| ||| || ||||| || | ||| || || Sbjct 337599 CACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGA 337658 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || || || || ||| | ||| ||||| ||||| | | | ||| || || Sbjct 337659 AGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC 337718 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 | || || || || || || | ||| | ||| || ||||| | |||| | ||| Sbjct 337719 TCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTT 337778 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || ||| | | |||||| || |||||| || || ||||| || |||||| || Sbjct 337779 ACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGTTGAATTG 337838 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC 78664 || ||||| ||||| | ||| |||| || | ||||||||| | | || || || Sbjct 337839 GAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCATGACGATGTC 337898 Query 78665 CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 || | ||||| ||||| || | | |||| | || || || || | | | Sbjct 337899 ATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGACCCATCTGTA 337958 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 || ||||| | || | ||| | || | |||| |||||| | ||||| | || Sbjct 337959 CAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGTTAGAAATGGC 338018 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| || || | | |||| ||||| || || || || || || ||| | ||| Sbjct 338019 AATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAGGCACATGTTT 338077 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || ||||||| || | ||| || || || | ||| Sbjct 338078 CAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 338120 >seq3 Length=1617349 Score = 212 bits (234), Expect = 9e-50 Identities = 587/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || ||| | || ||||| ||||| ||||| || |||| || || ||| Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||| || ||||| ||| | || || ||| || ||||| | | Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 ||||| |||||||| ||||| | ||| ||||||| ||| ||||| || | || Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| |||||||| || | ||| | ||||| |||||| ||||| || | | Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTC------TGT 421496 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATA---------CAACAAATGTTTAAACATTAA 48139 |||| | | |||| || | ||||| | |||||| | || | || Sbjct 421495 -GATGATTC--TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 421439 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || | ||||||||||| | ||| |||||||| || || || | Sbjct 421438 ACAGGCAAAGTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 421379 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | || || || | ||| || || || ||||| || ||||| || || Sbjct 421378 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 421319 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 | ||||| ||||| || || || | ||| || |||| |||||||| | | Sbjct 421318 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 421259 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| | |||||| |||||| | || || ||||| || |||| Sbjct 421258 AATCCATCTAATGGCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCAT 421200 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | |||| | ||| || ||| || | |||||| || || || | ||| Sbjct 421199 TCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 421140 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||||||||| || ||||| || || || || ||||| ||||| | ||||||| | Sbjct 421139 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 421080 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | | | || ||| |||| || || || || || ||||| ||||| Sbjct 421079 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 421020 Query 48556 CAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTC 48611 |||| || || | || | | | || ||| || | ||||| ||| | || ||| Sbjct 421019 CAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTC 420961 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||||| | ||| || || | ||| | ||||||||| |||||||| || ||||| ||| Sbjct 420960 CAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCT 420901 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 420900 CTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851 >seq5 Length=1432259 Score = 147 bits (162), Expect = 3e-30 Identities = 195/269 (72%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| || | |||||| ||||| || ||||||| |||| ||||| ||||||| || Sbjct 99809 AACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCAT 99750 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| ||||| ||||||| | || | | || || |||||||| ||||||||| Sbjct 99749 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 99690 Query 78122 TTCTAGATATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||| | ||||| || || | ||||| ||||| || || || ||||| | ||||||| Sbjct 99689 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTG 99632 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| |||| | || ||| |||| | ||| ||||| || ||||| | || Sbjct 99631 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCT 99572 Query 78240 GAAATATAACTTCCACTTGCGCGAATATT 78268 || |||||| ||| |||| | ||||| Sbjct 99571 GAGATATAAGCACCATTTGCCCTTATATT 99543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668070597760