Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq7 230 3e-55
seq3 203 5e-47
seq5 150 3e-31
>seq7
Length=951660
Score = 230 bits (254), Expect = 3e-55
Identities = 581/878 (66%), Gaps = 14/878 (2%)
Strand=Plus/Plus
Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409
|||||||||| || | || | ||| || ||||| |||||||| | ||||| || || |
Sbjct 336989 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 337048
Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467
|| || || |||||||| | || | ||| | |||| | ||| | ||| | |||
Sbjct 337049 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 337106
Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525
|| | | ||| || | | | ||||| || || || || || |||||||
Sbjct 337107 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 337164
Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585
||||| || ||||||| || || || ||| || ||| | | ||| | ||| ||
Sbjct 337165 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 337224
Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645
| | | || || | ||||| || ||||| || |||||||| || || | |||
Sbjct 337225 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 337284
Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
| || ||| |||||| || || |||||| | | || | ||| || | |||
Sbjct 337285 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 337341
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| || |||||||| || | || | || | |||| |||| || ||||| || ||
Sbjct 337342 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 337401
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| || |||| | | |||||||||||| |||||||| |||
Sbjct 337402 TCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 337461
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| || || |||| ||| ||| || | |||||| || ||| | || ||
Sbjct 337462 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 337521
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | |||||||| | ||||| ||||| ||||| || || || || ||
Sbjct 337522 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 337581
Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002
||| ||| ||||| | || ||||| |||||||| ||||| ||| || |||
Sbjct 337582 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 337641
Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062
|| || | ||| || || || || ||||| || || ||| | ||| ||||| |||||
Sbjct 337642 TTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 337701
Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122
| ||| ||| ||||| | || || || ||||| || | ||| | ||| || |||
Sbjct 337702 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 337761
Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182
|| ||||| || |||| || ||| | | |||||| || |||||| || || |||
Sbjct 337762 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 337821
Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
|| || |||||| || || ||||| ||||| | |||
Sbjct 337822 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 337859
>seq3
Length=1617349
Score = 203 bits (224), Expect = 5e-47
Identities = 579/881 (66%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| || || | || ||||| ||||| ||||| || |||| || || |||
Sbjct 421728 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 421669
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
|||||||| || || || ||||| || || || ||| || ||||| | |
Sbjct 421668 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 421609
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
||||| |||||||| ||||| | || ||||||| ||| ||||| || | ||
Sbjct 421608 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 421549
Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
|| |||||||| || | ||| | ||||| ||| || ||||| || | || ||
Sbjct 421548 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 421490
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| || | | | ||| | | ||||||| | || | ||||| |||||
Sbjct 421489 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 421430
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | |||||||||||| | ||| |||||||| || || || | || |||||
Sbjct 421429 GTCGGTGTGCAAGCCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 421370
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
| || ||| || | ||| || || || ||||| || ||||| || || | |||||
Sbjct 421369 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTC 421310
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAATCCACCT 46814
|| || ||||| || || | ||| || |||| || | |||| | ||||||| ||
Sbjct 421309 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 421250
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| | |||||||| || | || || ||||| || ||||| || | ||
Sbjct 421249 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 421190
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | ||| | | ||| || | || || || || || | ||| |||| || ||
Sbjct 421189 GTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 421130
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
|||||||| || || || || ||||| ||||| | ||||| | ||| || |||||
Sbjct 421129 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 421070
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | | || ||| ||| || || ||||| || ||||| ||||||||| || ||
Sbjct 421069 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 421010
Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109
| || | | | || ||| || | || ||| | | || | || ||||||||||
Sbjct 421009 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 420952
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | |||||
Sbjct 420951 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 420892
Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
| ||| || || | || | ||| || |||| |||||
Sbjct 420891 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 420851
>seq5
Length=1432259
Score = 150 bits (166), Expect = 3e-31
Identities = 184/249 (74%), Gaps = 4/249 (2%)
Strand=Plus/Minus
Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656
||| || | |||||| ||||| || ||||||| |||| ||||| ||||||| ||
Sbjct 99809 AACACGCTGCATAAAAAGATCCGGAATCCATAAAGCATAAAATAAGTCTCGGGCCCTCAT 99750
Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716
|||||| ||||| ||||||| | || | || ||| || |||||||| |||||||||
Sbjct 99749 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 99690
Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774
||| | ||||| || || |||| || ||||| || || || ||||| | |||||||
Sbjct 99689 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTG 99632
Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834
|| ||||| ||| |||| | || ||| |||| | || ||||| |||||||| | ||
Sbjct 99631 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTAGAAGTACCATTCGACCCT 99572
Query 76835 GAAATATAA 76843
|| ||||||
Sbjct 99571 GAGATATAA 99563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933651418880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |