Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 4e-31
seq5 149 1e-30
seq7 86.0 1e-11
>seq3
Length=1617349
Score = 150 bits (166), Expect = 4e-31
Identities = 143/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 1563021 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1563080
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 1563081 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 1563140
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 1563141 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 1563200
Query 283088 GAA 283090
|||
Sbjct 1563201 GAA 1563203
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 320556 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 320615
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | ||| || | | | |||||| | || | || ||||||
Sbjct 320616 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 320675
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| |||| || |||| |||||||||||| | ||||| ||| || ||
Sbjct 320676 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 320731
>seq5
Length=1432259
Score = 149 bits (164), Expect = 1e-30
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||||| || | ||| || || |||||
Sbjct 1264067 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 1264008
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 1264007 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 1263948
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | || || |||||||| || | ||||| ||
Sbjct 1263947 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 1263888
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 1263887 GAAAATTTGCAT 1263876
>seq7
Length=951660
Score = 86.0 bits (94), Expect = 1e-11
Identities = 180/263 (68%), Gaps = 9/263 (3%)
Strand=Plus/Plus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||||| ||||| || || ||| ||||| | || || ||| || |||| || |||
Sbjct 156941 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACACGGTGAA 157000
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| ||| | | ||||||| ||| |||||| ||||| |||| |||| |||||||
Sbjct 157001 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 157058
Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601
|||| | ||| | |||| | | || ||| | || ||||| | ||||| | |
Sbjct 157059 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 157116
Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661
||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| ||
Sbjct 157117 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 157176
Query 301662 CATCACCGATGAAATCAAAAGAA 301684
| ||| | ||||| | |||||
Sbjct 157177 TTTGACCAACGAAAT-ACAAGAA 157198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738073446936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |