Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3 156 4e-33 >seq3 Length=1617349 Score = 156 bits (172), Expect = 4e-33 Identities = 537/823 (65%), Gaps = 21/823 (3%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 ||||||| ||||| || ||||| | || || || ||||||||||| || ||||| |||| Sbjct 421706 TTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAATGGGTTAG 421647 Query 23300 AAGTATTATA-TACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356 || || || ||| ||| | | || || | || ||||| ||||||| Sbjct 421646 TGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTA---GTCTGTCTGCAACAAATT 421590 Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416 | | ||||| |||||||||| ||| ||||| | ||| || || | || || Sbjct 421589 CGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGA 421530 Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTT 23473 ||| || ||||| || |||||| ||| | || ||| | ||||| ||| Sbjct 421529 TGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAAT--CTTTGG 421472 Query 23474 CACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTT 23533 || | | | | || |||| | || | ||||| ||||| || || | ||||| Sbjct 421471 ATCTGGCTTGTTCTTC-AAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAGCCTT 421413 Query 23534 CATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAA 23593 |||| || | ||||||||| || || || || || |||||||| || || || || | Sbjct 421412 CATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCA 421353 Query 23594 TCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCA 23653 ||| || || ||||| || || || || || || | ||| || || || || || || | Sbjct 421352 ACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAA 421293 Query 23654 CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCT 23713 | | | | | | || || | | |||| ||||||| | | | ||| | ||||| Sbjct 421292 CCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCT 421233 Query 23714 TCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTA 23772 | ||| | ||| |||||||| || || || | | |||| | ||| | | | Sbjct 421232 TTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA-AGAAGTCGTGTTCCTTAGGA 421174 Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 || | || || || ||||| | || ||| |||| || || || ||||| || | Sbjct 421173 TCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATA 421114 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || || || || || ||||| | ||||| | | ||| || ||| | | || ||| Sbjct 421113 ATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCC 421054 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT- 23951 | || |||||||| || |||||||| |||||||||||| ||||| || || Sbjct 421053 ACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATG 420994 Query 23952 -AAAATGTCT--TTCATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007 ||||| ||| ||| || ||| || | || ||||| |||| || ||| || || |||| Sbjct 420993 AAAAATCTCTCGTTC-TC-GTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAAT 420936 Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 | | ||| ||| | ||||||||| ||| ||| | |||||| Sbjct 420935 CGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 420893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487452437600