Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5 138 8e-28 seq3 116 3e-21 >seq5 Length=1432259 Score = 138 bits (152), Expect = 8e-28 Identities = 172/232 (74%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| |||||| || ||||||||||||||||| || | Sbjct 1264102 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1264043 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || |||| || Sbjct 1264042 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1263985 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | |||||||||| ||||| Sbjct 1263984 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGATTC 1263927 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| ||||| ||||| || || |||||||| ||||| ||||||||| Sbjct 1263926 GACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 1263875 >seq3 Length=1617349 Score = 116 bits (128), Expect = 3e-21 Identities = 163/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| |||||||| |||| |||||| ||| ||||||||||||||||| || Sbjct 1562983 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 1563042 Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | ||| | |||| |||| ||||| || ||||||||||| | || || |||| Sbjct 1563043 GACAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTG 1563100 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | |||||||| | || Sbjct 1563101 GTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 1563158 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 ||| || |||| || || ||||| || || | |||||| ||||| Sbjct 1563159 TTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1563203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990031459828