Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06-
09] 84 sequences; 11,537,868 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 8e-28
seq3 116 3e-21
>seq5
Length=1432259
Score = 138 bits (152), Expect = 8e-28
Identities = 172/232 (74%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| |||||| || ||||||||||||||||| || |
Sbjct 1264102 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1264043
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || |||| ||
Sbjct 1264042 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1263985
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | |||||||||| |||||
Sbjct 1263984 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGATTC 1263927
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| |||| ||||| ||||| || || |||||||| ||||| |||||||||
Sbjct 1263926 GACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 1263875
>seq3
Length=1617349
Score = 116 bits (128), Expect = 3e-21
Identities = 163/225 (72%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| |||||||| |||| |||||| ||| ||||||||||||||||| ||
Sbjct 1562983 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 1563042
Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | ||| | |||| |||| ||||| || ||||||||||| | || || ||||
Sbjct 1563043 GACAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTG 1563100
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 1563101 GTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 1563158
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
||| || |||| || || ||||| || || | |||||| |||||
Sbjct 1563159 TTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1563203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990031459828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |