Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq65 237 2e-57
seq582 161 1e-34
seq35 129 7e-25
>seq65
Length=9430
Score = 237 bits (262), Expect = 2e-57
Identities = 1202/1897 (63%), Gaps = 45/1897 (2%)
Strand=Plus/Plus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | ||||| || || | || ||||| | || || | |||||||||||| |
Sbjct 5993 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGATAGTACATAC 6052
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || || | ||| |||||||||| |||||||| || | || | | |
Sbjct 6053 CGGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 6112
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | || || || |||| ||||| |||||||||| | || | | ||| || |
Sbjct 6113 GAGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATGTAAGCAGCACGGTCAGCGG 6172
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 53035
|||| | || || |||||| | |||||||||| ||| || || || || |||
Sbjct 6173 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC- 6231
Query 53036 TCTTCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092
|||| ||| | ||||| || || ||||| ||| ||| | || || |||
Sbjct 6232 TCTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTC 6291
Query 53093 ATCTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 53151
|| | |||| ||| ||| | || ||| | | || | | || || || |
Sbjct 6292 ATAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 6350
Query 53152 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGA 53211
||| ||||| ||||| || || | |||| ||| || || || || || || | | |
Sbjct 6351 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 6410
Query 53212 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 53271
||| || | ||||||||||||| || || ||||| ||||| || || | ||| |||
Sbjct 6411 CTCGTTGTAACCCAAAATTTGAGATGTAGAAGCAGTTGGCATTGGAGCGAGCAACAAAGA 6470
Query 53272 ATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCG 53330
||||| ||||||| | |||||| | | || | || | ||||| | ||| || | |
Sbjct 6471 GTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCA-AGTTATCCCATTCCCATAGGTTAG 6529
Query 53331 ACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTAC 53388
|| | || ||||| |||| | | || || |||
Sbjct 6530 TTGGGGTCTTACCCCATAGATCGAA--TTGTAACTTACCTTCAGATGCTGGAGAGCCTGG 6587
Query 53389 ATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTA 53448
| | || ||||| ||||| | || || | ||| || || | |||||||
Sbjct 6588 GAAAGATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCGTG 6647
Query 53449 ATAAATGGTTTCGAAGATCTTCTTATTTAGATCT-TGTGCTTCCAGGCTATCAAATGGAT 53507
|| || ||||| ||||| | || | |||| | |||||| | ||||||||
Sbjct 6648 GTAGATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCGGAGTCAAATGGCA 6706
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
|| || | || || ||||| ||||| ||||||||||| | | |||||||| ||||
Sbjct 6707 AACGTAGCATCATGAAAGCGTCCGCTAAACCTTGAACACCCAATGCAATAGGTCTGTGTC 6766
Query 53568 TCTTATTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624
|| | || || || ||| ||| || |||||||| ||| || || ||| | |
Sbjct 6767 TCATGTTTGATCTTCTGGCAGTTTC---AACTGGATAATAGTTACGGTCAATGATTCTGT 6823
Query 53625 TGAGGTTTCTGA-CAATTACTTTGACCACATCCTTCAG---TTTGA----GAAAATCAAA 53676
| | ||| | | ||| ||| || | ||| | || ||||| | | | |
Sbjct 6824 TCAAGTTGCGGGTCAAAACCTTAGAG-ATATCATGCAACTTTTTGAAGTTGTACGTTTGA 6882
Query 53677 TTGT--CCATC------TATTACAAACAT-GTT--CAATGCAATAGATGCCAGATTACAA 53725
| | ||||| || | ||| | | | ||| |||||||| |||| |||||
Sbjct 6883 GTCTTACCATCGCTTGATAGTTCAATGAACGCTGGCAAAGCAATAGAAGCCAAGTTACAG 6942
Query 53726 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 53785
|| || || | | | | |||| | || ||| || | || | |||||
Sbjct 6943 ACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCACAACACAAGTTCGAAGACTTG 7002
Query 53786 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 53845
|| || || || || | |||||||||||| |||||||| ||||| || || || ||||||
Sbjct 7003 ATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCATGAAT 7062
Query 53846 GGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATT 53905
|| ||||||||||| | || | ||| | || || | ||| | ||||||| |
Sbjct 7063 GGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCTTGACA 7122
Query 53906 ATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTC 53963
| ||| || | | |||||| ||||| || |||||| |||||| || || |
Sbjct 7123 GTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTCATCAC 7180
Query 53964 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 54023
| |||||| | || || ||||| ||| | | ||| | ||| ||| ||| |
Sbjct 7181 CGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTCGTTCT 7240
Query 54024 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 54083
| |||| ||||| || ||||| || ||||| || ||| || | ||||| | |
Sbjct 7241 TTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCAC 7300
Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143
||| || || || |||||| | | |||| ||| | | ||||| || ||||
Sbjct 7301 GGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCC 7360
Query 54144 ACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 54203
| || || | ||| | || | | ||||| | ||||| || || || || | ||| |
Sbjct 7361 ATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAAC 7420
Query 54204 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 54263
||| ||||| || |||| | | ||||||||||||||| || || | ||| || || |
Sbjct 7421 GAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTAC 7480
Query 54264 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCA 54323
| | || || || | | |||||| || ||| | ||| || || || ||
Sbjct 7481 CAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGG 7540
Query 54324 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 54383
| |||||||| | || ||| || || || || || || || || || ||| |||
Sbjct 7541 TCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCT 7600
Query 54384 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 54443
||||| | ||| ||||| |||||||| || || ||| || ||||| || | |
Sbjct 7601 TCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTG 7660
Query 54444 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGT 54503
| || |||||||| || || || || ||| | ||| ||||| || || | | | |
Sbjct 7661 TTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 7720
Query 54504 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 54563
| ||||| | || || || || || || | ||| | |||||| ||||| | ||||
Sbjct 7721 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCGTTCAG 7780
Query 54564 CGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 54623
| | ||| ||| ||| | |||||||| || |||||| || || ||||| || ||||
Sbjct 7781 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 7840
Query 54624 TGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|| || || |||| ||||| | ||| | |||||
Sbjct 7841 TGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTT 7877
>seq582
Length=15002
Score = 161 bits (178), Expect = 1e-34
Identities = 576/886 (65%), Gaps = 22/886 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
||||| || ||| |||| || || || || ||| ||||| | | || || || |
Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 2097
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
| ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | |
Sbjct 2096 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 2037
Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| ||| || ||||| || | ||| | |||| ||| || || || ||||| ||
Sbjct 2036 GAGAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 1978
Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
|| |||| || | | | | || | | | | | ||||| | || | |||||
Sbjct 1977 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACA 1922
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || ||| ||| | ||| || ||||| | ||| |||||||| || || || | ||
Sbjct 1921 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACC 1862
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| | || ||| || | ||| || |||| || || || ||||| || || |
Sbjct 1861 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 1802
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTAT 24313
||||| || || || || |||| | |||||| |||| | | || |||| | ||
Sbjct 1801 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAAT 1742
Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372
||| || || ||||| | ||||| | ||| | || || || || || ||||| |
Sbjct 1741 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 1683
Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432
| | | | | || ||| ||| || | || || |||||||| | ||| | |
Sbjct 1682 ACAAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCT 1623
Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
| || ||||||||||| || ||||| || |||||||| || | || || | ||| |
Sbjct 1622 CGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTT 1563
Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552
| || || | || ||| | || ||||| ||||| || || || || ||||
Sbjct 1562 GCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 1503
Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609
| ||||| | || || ||| || | ||| ||| || || || ||||| |
Sbjct 1502 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 1443
Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
||| || ||| || || | ||| | |||||| | |||||||| || ||||| || | |
Sbjct 1442 CATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 1383
Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | |||||| || || || | ||||| |||| |||||
Sbjct 1382 TATAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337
>seq35
Length=84627
Score = 129 bits (142), Expect = 7e-25
Identities = 202/287 (70%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 61057 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 61116
Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108
|||||||| || || ||||| |||| || || ||| || ||||| ||||||
Sbjct 61117 CGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTT 61176
Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA- 54167
| | || | | ||| | ||||| ||| |||||| |||||||||||||| || ||
Sbjct 61177 TCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAAGTATAT--ACAAAAG 61234
Query 54168 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226
| || || |||||||| || || || || | ||||| || ||||| ||| |||| | |
Sbjct 61235 GCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGC 61294
Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273
| ||| || | | ||||| || | |||||| | ||| ||||||||
Sbjct 61295 AGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATATA 61341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593713466014080
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