Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq65 237 2e-57 seq582 161 1e-34 seq35 129 7e-25 >seq65 Length=9430 Score = 237 bits (262), Expect = 2e-57 Identities = 1202/1897 (63%), Gaps = 45/1897 (2%) Strand=Plus/Plus Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 ||||||| | ||||| || || | || ||||| | || || | |||||||||||| | Sbjct 5993 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGATAGTACATAC 6052 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 | || || | ||| |||||||||| |||||||| || | || | | | Sbjct 6053 CGGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 6112 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 || | || || || |||| ||||| |||||||||| | || | | ||| || | Sbjct 6113 GAGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATGTAAGCAGCACGGTCAGCGG 6172 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 53035 |||| | || || |||||| | |||||||||| ||| || || || || ||| Sbjct 6173 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC- 6231 Query 53036 TCTTCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092 |||| ||| | ||||| || || ||||| ||| ||| | || || ||| Sbjct 6232 TCTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTC 6291 Query 53093 ATCTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 53151 || | |||| ||| ||| | || ||| | | || | | || || || | Sbjct 6292 ATAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 6350 Query 53152 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGA 53211 ||| ||||| ||||| || || | |||| ||| || || || || || || | | | Sbjct 6351 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 6410 Query 53212 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 53271 ||| || | ||||||||||||| || || ||||| ||||| || || | ||| ||| Sbjct 6411 CTCGTTGTAACCCAAAATTTGAGATGTAGAAGCAGTTGGCATTGGAGCGAGCAACAAAGA 6470 Query 53272 ATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCG 53330 ||||| ||||||| | |||||| | | || | || | ||||| | ||| || | | Sbjct 6471 GTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCA-AGTTATCCCATTCCCATAGGTTAG 6529 Query 53331 ACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTAC 53388 || | || ||||| |||| | | || || ||| Sbjct 6530 TTGGGGTCTTACCCCATAGATCGAA--TTGTAACTTACCTTCAGATGCTGGAGAGCCTGG 6587 Query 53389 ATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTA 53448 | | || ||||| ||||| | || || | ||| || || | ||||||| Sbjct 6588 GAAAGATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCGTG 6647 Query 53449 ATAAATGGTTTCGAAGATCTTCTTATTTAGATCT-TGTGCTTCCAGGCTATCAAATGGAT 53507 || || ||||| ||||| | || | |||| | |||||| | |||||||| Sbjct 6648 GTAGATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCGGAGTCAAATGGCA 6706 Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 || || | || || ||||| ||||| ||||||||||| | | |||||||| |||| Sbjct 6707 AACGTAGCATCATGAAAGCGTCCGCTAAACCTTGAACACCCAATGCAATAGGTCTGTGTC 6766 Query 53568 TCTTATTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624 || | || || || ||| ||| || |||||||| ||| || || ||| | | Sbjct 6767 TCATGTTTGATCTTCTGGCAGTTTC---AACTGGATAATAGTTACGGTCAATGATTCTGT 6823 Query 53625 TGAGGTTTCTGA-CAATTACTTTGACCACATCCTTCAG---TTTGA----GAAAATCAAA 53676 | | ||| | | ||| ||| || | ||| | || ||||| | | | | Sbjct 6824 TCAAGTTGCGGGTCAAAACCTTAGAG-ATATCATGCAACTTTTTGAAGTTGTACGTTTGA 6882 Query 53677 TTGT--CCATC------TATTACAAACAT-GTT--CAATGCAATAGATGCCAGATTACAA 53725 | | ||||| || | ||| | | | ||| |||||||| |||| ||||| Sbjct 6883 GTCTTACCATCGCTTGATAGTTCAATGAACGCTGGCAAAGCAATAGAAGCCAAGTTACAG 6942 Query 53726 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 53785 || || || | | | | |||| | || ||| || | || | ||||| Sbjct 6943 ACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCACAACACAAGTTCGAAGACTTG 7002 Query 53786 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 53845 || || || || || | |||||||||||| |||||||| ||||| || || || |||||| Sbjct 7003 ATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCATGAAT 7062 Query 53846 GGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATT 53905 || ||||||||||| | || | ||| | || || | ||| | ||||||| | Sbjct 7063 GGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCTTGACA 7122 Query 53906 ATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTC 53963 | ||| || | | |||||| ||||| || |||||| |||||| || || | Sbjct 7123 GTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTCATCAC 7180 Query 53964 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 54023 | |||||| | || || ||||| ||| | | ||| | ||| ||| ||| | Sbjct 7181 CGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTCGTTCT 7240 Query 54024 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 54083 | |||| ||||| || ||||| || ||||| || ||| || | ||||| | | Sbjct 7241 TTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCAC 7300 Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143 ||| || || || |||||| | | |||| ||| | | ||||| || |||| Sbjct 7301 GGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCC 7360 Query 54144 ACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 54203 | || || | ||| | || | | ||||| | ||||| || || || || | ||| | Sbjct 7361 ATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAAC 7420 Query 54204 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 54263 ||| ||||| || |||| | | ||||||||||||||| || || | ||| || || | Sbjct 7421 GAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTAC 7480 Query 54264 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCA 54323 | | || || || | | |||||| || ||| | ||| || || || || Sbjct 7481 CAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGG 7540 Query 54324 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 54383 | |||||||| | || ||| || || || || || || || || || ||| ||| Sbjct 7541 TCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCT 7600 Query 54384 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 54443 ||||| | ||| ||||| |||||||| || || ||| || ||||| || | | Sbjct 7601 TCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTG 7660 Query 54444 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGT 54503 | || |||||||| || || || || ||| | ||| ||||| || || | | | | Sbjct 7661 TTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 7720 Query 54504 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 54563 | ||||| | || || || || || || | ||| | |||||| ||||| | |||| Sbjct 7721 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCGTTCAG 7780 Query 54564 CGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 54623 | | ||| ||| ||| | |||||||| || |||||| || || ||||| || |||| Sbjct 7781 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 7840 Query 54624 TGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 || || || |||| ||||| | ||| | ||||| Sbjct 7841 TGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTT 7877 >seq582 Length=15002 Score = 161 bits (178), Expect = 1e-34 Identities = 576/886 (65%), Gaps = 22/886 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || ||| | |||||||| ||||| |||||||| | || || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961 ||||| || ||| |||| || || || || ||| ||||| | | || || || | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 2097 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021 | ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | | Sbjct 2096 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 2037 Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 | ||| || ||||| || | ||| | |||| ||| || || || ||||| || Sbjct 2036 GAGAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 1978 Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136 || |||| || | | | | || | | | | | ||||| | || | ||||| Sbjct 1977 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACA 1922 Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196 || || ||| ||| | ||| || ||||| | ||| |||||||| || || || | || Sbjct 1921 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACC 1862 Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256 ||||| | || ||| || | ||| || |||| || || || ||||| || || | Sbjct 1861 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 1802 Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTAT 24313 ||||| || || || || |||| | |||||| |||| | | || |||| | || Sbjct 1801 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAAT 1742 Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372 ||| || || ||||| | ||||| | ||| | || || || || || ||||| | Sbjct 1741 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 1683 Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432 | | | | | || ||| ||| || | || || |||||||| | ||| | | Sbjct 1682 ACAAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCT 1623 Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492 | || ||||||||||| || ||||| || |||||||| || | || || | ||| | Sbjct 1622 CGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTT 1563 Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552 | || || | || ||| | || ||||| ||||| || || || || |||| Sbjct 1562 GCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 1503 Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609 | ||||| | || || ||| || | ||| ||| || || || ||||| | Sbjct 1502 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 1443 Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669 ||| || ||| || || | ||| | |||||| | |||||||| || ||||| || | | Sbjct 1442 CATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 1383 Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 |||| | |||||| || || || | ||||| |||| ||||| Sbjct 1382 TATAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 >seq35 Length=84627 Score = 129 bits (142), Expect = 7e-25 Identities = 202/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048 |||||| |||| | | ||||| ||| | | || | || |||| |||||| ||||| Sbjct 61057 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 61116 Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108 |||||||| || || ||||| |||| || || ||| || ||||| |||||| Sbjct 61117 CGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTT 61176 Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA- 54167 | | || | | ||| | ||||| ||| |||||| |||||||||||||| || || Sbjct 61177 TCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAAGTATAT--ACAAAAG 61234 Query 54168 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226 | || || |||||||| || || || || | ||||| || ||||| ||| |||| | | Sbjct 61235 GCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGC 61294 Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273 | ||| || | | ||||| || | |||||| | ||| |||||||| Sbjct 61295 AGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATATA 61341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593713466014080