Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq582 187 2e-42
>seq582
Length=15002
Score = 187 bits (206), Expect = 2e-42
Identities = 556/848 (66%), Gaps = 15/848 (2%)
Strand=Plus/Minus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || ||
Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140
Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078
|| || | |||||||| | | || || | | || || ||| || || |||
Sbjct 2139 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 2080
Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138
||||| | || || ||||| |||||| |||||| || | || ||| || | ||
Sbjct 2079 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 2020
Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198
|| | || | | ||||| || | ||| ||||| |||| || |||| | ||| |
Sbjct 2019 TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1963
Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255
||| | | || ||| || || | || | || ||| ||||| || |||||
Sbjct 1962 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAA 1903
Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315
||||| || || | || || |||||||| ||||| | ||||||||| | || ||
Sbjct 1902 CCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTC 1843
Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375
|| | ||| || || || || || |||||||| || || | |||||| || || || ||
Sbjct 1842 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1783
Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttc-tatccattttttagcccaat 16433
|||||||||| ||| | || | | || | | | |||||| | | ||||| |
Sbjct 1782 GCAACCAATCTTTCAGCATATAGAGC--TTCGTCGTCACGAATCCATCTAATGGCCCATT 1725
Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTT 16493
|| |||| ||| | ||| | || || ||||| || || | | | || |
Sbjct 1724 GAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCT 1665
Query 16494 TGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCA 16553
| ||| || ||||| || || | || ||| | || || ||||| || ||||
Sbjct 1664 TAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCA 1605
Query 16554 TTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACC 16613
| || || ||||| || ||||| | ||||| | ||||| || |||| | | ||
Sbjct 1604 TCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGT 1545
Query 16614 TTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGT 16672
|||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | ||
Sbjct 1544 TTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG- 1486
Query 16673 TTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGAT 16729
|| ||| | | ||||| || | | || ||||||| | ||| || ||
Sbjct 1485 GAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGAC 1426
Query 16730 AAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATG 16789
||||||| ||||| ||||||||||||| || | || | ||||| || ||| ||
Sbjct 1425 AAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCAGATT 1366
Query 16790 TCTTCGTA 16797
|| | |||
Sbjct 1365 TCGTGGTA 1358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462505663585600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |