Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq582 187 2e-42 >seq582 Length=15002 Score = 187 bits (206), Expect = 2e-42 Identities = 556/848 (66%), Gaps = 15/848 (2%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || || Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078 || || | |||||||| | | || || | | || || ||| || || ||| Sbjct 2139 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 2080 Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138 ||||| | || || ||||| |||||| |||||| || | || ||| || | || Sbjct 2079 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 2020 Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198 || | || | | ||||| || | ||| ||||| |||| || |||| | ||| | Sbjct 2019 TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1963 Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255 ||| | | || ||| || || | || | || ||| ||||| || ||||| Sbjct 1962 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAA 1903 Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315 ||||| || || | || || |||||||| ||||| | ||||||||| | || || Sbjct 1902 CCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTC 1843 Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375 || | ||| || || || || || |||||||| || || | |||||| || || || || Sbjct 1842 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1783 Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttc-tatccattttttagcccaat 16433 |||||||||| ||| | || | | || | | | |||||| | | ||||| | Sbjct 1782 GCAACCAATCTTTCAGCATATAGAGC--TTCGTCGTCACGAATCCATCTAATGGCCCATT 1725 Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTT 16493 || |||| ||| | ||| | || || ||||| || || | | | || | Sbjct 1724 GAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCT 1665 Query 16494 TGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCA 16553 | ||| || ||||| || || | || ||| | || || ||||| || |||| Sbjct 1664 TAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCA 1605 Query 16554 TTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACC 16613 | || || ||||| || ||||| | ||||| | ||||| || |||| | | || Sbjct 1604 TCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGT 1545 Query 16614 TTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGT 16672 |||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | || Sbjct 1544 TTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG- 1486 Query 16673 TTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGAT 16729 || ||| | | ||||| || | | || ||||||| | ||| || || Sbjct 1485 GAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGAC 1426 Query 16730 AAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATG 16789 ||||||| ||||| ||||||||||||| || | || | ||||| || ||| || Sbjct 1425 AAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCAGATT 1366 Query 16790 TCTTCGTA 16797 || | ||| Sbjct 1365 TCGTGGTA 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462505663585600