Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq582 161 1e-34
>seq582
Length=15002
Score = 161 bits (178), Expect = 1e-34
Identities = 384/571 (67%), Gaps = 17/571 (3%)
Strand=Plus/Minus
Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259
|||||| ||||| || || | || |||||||| | ||| | ||||||||| |||||
Sbjct 1927 TAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGT 1868
Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319
|| ||||||||||| || || || ||||| || || |||||||| || || || ||
Sbjct 1867 CAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAA 1808
Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT- 14378
|| | || || || ||||| ||||| | |||| ||| || | |||| | ||
Sbjct 1807 AAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTC 1748
Query 14379 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14438
||| |||||| | | ||||||| || |||| ||| || || |||||||| |
Sbjct 1747 ACGA-ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGG 1689
Query 14439 CATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCT 14496
|||| || || || | ||| |||| | |||| ||||| || ||||| | ||
Sbjct 1688 CATTCAACAAGAACTCGTGCTCCTTAGGATCCTTG--ATGTAAGTGTCAATCAACAACGA 1631
Query 14497 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556
||| | || ||||| ||||||||||| || || ||||| || || || | |||||
Sbjct 1630 ATAAGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTC 1571
Query 14557 TGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14616
|| ||| ||||| | | | || |||| |||| ||||| || || ||||||||
Sbjct 1570 TGGAATTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 1511
Query 14617 AGCTGCAAAAAATGC---CAATAT-GTTTTTAATAAAGTATTGCTC---TTCATTGCTGA 14669
||| ||||| || || || | | | | || || | | | || |||||| |||
Sbjct 1510 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATT-CTG- 1453
Query 14670 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14729
|| ||||| || | |||||| || | ||| | ||| ||| | ||||||||| |
Sbjct 1452 --TTGTTCCAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGG 1395
Query 14730 CAACAGCTTTTTTATACATTACCCATATTTC 14760
| | ||| | ||||| | |||| |||||
Sbjct 1394 CCTCGGCTCTCTTATAAGCTTCCCAGATTTC 1364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482338991865280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |