Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq35 96.9 3e-15 seq493 91.5 1e-13 seq689 84.2 2e-11 >seq35 Length=84627 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 ||||||||| ||| ||||||||||||||| |||||||| || || || | || ||||| Sbjct 61090 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGC 61149 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 | || || ||||| || |||||| | | | || ||||| | | ||| |||| Sbjct 61150 CCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATG 61209 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||| || || | ||| | ||| || || || | || || || || || ||||| || Sbjct 61210 CCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATA 61269 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 | ||||||||||| | || | ||||| ||||| Sbjct 61270 TCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCAC 61305 >seq493 Length=23338 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || || || || || ||| | || || ||| | || Sbjct 23125 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 23184 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||| | || || ||||| Sbjct 23185 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 23244 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || || ||||| || || |||||||| || ||| || || || || Sbjct 23245 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 23304 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| ||||| ||||| || ||||| |||| Sbjct 23305 CATCCAAAAGGAATCTACCCTTCACTTGGT 23334 >seq689 Length=43288 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| |||| || || || ||||| | || || ||| | || |||| | Sbjct 11236 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 11295 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | ||||| | || ||||||||||| | || || ||||| || | | Sbjct 11296 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 11355 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || ||||| || || ||||||||| || ||| || || || ||||| ||||| Sbjct 11356 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 11415 Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| |||| | ||||| || || |||| Sbjct 11416 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 11456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760293000320