Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq35 96.9 3e-15
seq493 91.5 1e-13
seq689 84.2 2e-11
>seq35
Length=84627
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
||||||||| ||| ||||||||||||||| |||||||| || || || | || |||||
Sbjct 61090 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGC 61149
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
| || || ||||| || |||||| | | | || ||||| | | ||| ||||
Sbjct 61150 CCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATG 61209
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| || || | ||| | ||| || || || | || || || || || ||||| ||
Sbjct 61210 CCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATA 61269
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553
| ||||||||||| | || | ||||| |||||
Sbjct 61270 TCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCAC 61305
>seq493
Length=23338
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || || || || || ||| | || || ||| | ||
Sbjct 23125 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 23184
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||||| | || || |||||
Sbjct 23185 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 23244
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | | || || ||||| || || |||||||| || ||| || || || ||
Sbjct 23245 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 23304
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||| ||||| ||||| || ||||| ||||
Sbjct 23305 CATCCAAAAGGAATCTACCCTTCACTTGGT 23334
>seq689
Length=43288
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| |||| || || || ||||| | || || ||| | || |||| |
Sbjct 11236 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 11295
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | ||||| | || ||||||||||| | || || ||||| || | |
Sbjct 11296 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 11355
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || ||||||||| || ||| || || || ||||| |||||
Sbjct 11356 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 11415
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| |||| | ||||| || || ||||
Sbjct 11416 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 11456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445760293000320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |