Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq582 111 3e-19
seq1062 109 1e-18
seq65 89.7 1e-12
>seq582
Length=15002
Score = 111 bits (122), Expect = 3e-19
Identities = 296/445 (67%), Gaps = 17/445 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| || ||||| | || || |||| | ||||| |||| ||||||
Sbjct 1778 GTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCTGG 1837
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | |||| | |||| ||| | || | ||| || || || |||| || ||
Sbjct 1838 TTGAAGAAGAAGGGTTTGATGCCAGGTTTGACATTCTCAAACGAATTGATTTGCAGAGAT 1897
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||| || | || || | | |||| || | |
Sbjct 1898 GAAGGTTTGCACACCGACTTTGCCTGTTTACTATTCCATCA----TTTGAAGAA---CAA 1950
Query 102098 TCAAGAGA-AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || |||| | |||| | |||| ||||| || || ||| |||| |
Sbjct 1951 GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAA-AAGAGAT 2009
Query 102154 TCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212
|| || | | || || ||| || |||| |||||| | ||||||| ||| |
Sbjct 2010 ACTTCATTGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAACCAAT 2069
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAA 102270
|| | |||||||| ||||| | |||| |||||| | || || ||||| |||| ||
Sbjct 2070 ACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAAT--ACTACAA 2127
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| || ||||| ||| || ||||| || |||||| | | ||| ||||| || ||
Sbjct 2128 CGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTCTT 2187
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 2188 CGAAAAGAGAGTGTCAGACTACCAA 2212
>seq1062
Length=20682
Score = 109 bits (120), Expect = 1e-18
Identities = 168/237 (71%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 35384 GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCT 35443
|||||| ||||| ||||||||||| || || || ||||||||| | ||||| || ||
Sbjct 8490 GATAGACGTGAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCA 8431
Query 35444 GAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATA 35503
||||| | || ||| |||||| | ||| | ||| | ||||| || | || |
Sbjct 8430 GAATACAAGACATGTGACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTG 8371
Query 35504 CTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562
| | | ||| |||| ||||| ||||||||||||| || ||| |||||||||| ||
Sbjct 8370 ATTCATAAGTTGA-AGAACAATCCTTATGATAGAAGGATTATCATGTCGGCATGGAACCC 8312
Query 35563 TATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| ||| | | ||||||||||| |||||||| || |||| ||||||||
Sbjct 8311 TCCTGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGT 8255
>seq65
Length=9430
Score = 89.7 bits (98), Expect = 1e-12
Identities = 182/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| ||| | || | || ||||| ||||| ||||| || || ||||| | |||
Sbjct 7513 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 7572
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| |||||||| ||||| ||| || | | | ||| ||||| || || || | |||
Sbjct 7573 TCGTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 7632
Query 94894 GGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
|| ||| || ||| ||| || ||||| || ||||| || || || || ||
Sbjct 7633 GGA-TGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGA 7691
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| || | || ||||| | || || || ||| ||||| || |||||||||||
Sbjct 7692 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 7751
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||| ||||||| |||||||| |||
Sbjct 7752 TCTCATGATCATGTGTTGAGGGCGTTCA 7779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989570103766680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |