Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq582 111 3e-19 seq1062 109 1e-18 seq65 89.7 1e-12 >seq582 Length=15002 Score = 111 bits (122), Expect = 3e-19 Identities = 296/445 (67%), Gaps = 17/445 (4%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| || ||||| | || || |||| | ||||| |||| |||||| Sbjct 1778 GTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCTGG 1837 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | |||| | |||| ||| | || | ||| || || || |||| || || Sbjct 1838 TTGAAGAAGAAGGGTTTGATGCCAGGTTTGACATTCTCAAACGAATTGATTTGCAGAGAT 1897 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || ||||||||| || | || || | | |||| || | | Sbjct 1898 GAAGGTTTGCACACCGACTTTGCCTGTTTACTATTCCATCA----TTTGAAGAA---CAA 1950 Query 102098 TCAAGAGA-AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | ||| || |||| | |||| | |||| ||||| || || ||| |||| | Sbjct 1951 GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAA-AAGAGAT 2009 Query 102154 TCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212 || || | | || || ||| || |||| |||||| | ||||||| ||| | Sbjct 2010 ACTTCATTGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAACCAAT 2069 Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAA 102270 || | |||||||| ||||| | |||| |||||| | || || ||||| |||| || Sbjct 2070 ACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAAT--ACTACAA 2127 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 || || ||||| ||| || ||||| || |||||| | | ||| ||||| || || Sbjct 2128 CGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTCTT 2187 Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 2188 CGAAAAGAGAGTGTCAGACTACCAA 2212 >seq1062 Length=20682 Score = 109 bits (120), Expect = 1e-18 Identities = 168/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 35384 GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCT 35443 |||||| ||||| ||||||||||| || || || ||||||||| | ||||| || || Sbjct 8490 GATAGACGTGAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCA 8431 Query 35444 GAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATA 35503 ||||| | || ||| |||||| | ||| | ||| | ||||| || | || | Sbjct 8430 GAATACAAGACATGTGACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTG 8371 Query 35504 CTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 | | | ||| |||| ||||| ||||||||||||| || ||| |||||||||| || Sbjct 8370 ATTCATAAGTTGA-AGAACAATCCTTATGATAGAAGGATTATCATGTCGGCATGGAACCC 8312 Query 35563 TATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | ||| | | ||||||||||| |||||||| || |||| |||||||| Sbjct 8311 TCCTGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGT 8255 >seq65 Length=9430 Score = 89.7 bits (98), Expect = 1e-12 Identities = 182/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| ||| | || | || ||||| ||||| ||||| || || ||||| | ||| Sbjct 7513 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 7572 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || |||||||| ||||| ||| || | | | ||| ||||| || || || | ||| Sbjct 7573 TCGTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 7632 Query 94894 GGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || ||| || ||| ||| || ||||| || ||||| || || || || || Sbjct 7633 GGA-TGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGA 7691 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| || | || ||||| | || || || ||| ||||| || ||||||||||| Sbjct 7692 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 7751 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040 | ||| ||||||| |||||||| ||| Sbjct 7752 TCTCATGATCATGTGTTGAGGGCGTTCA 7779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989570103766680