Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq35 111 1e-19 >seq35 Length=84627 Score = 111 bits (122), Expect = 1e-19 Identities = 422/650 (65%), Gaps = 27/650 (4%) Strand=Plus/Plus Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055 ||||| ||||||| ||||| || |||| |||||| | ||| || | ||||| ||| | Sbjct 61076 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAA 61135 Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115 ||||| ||| || || |||||| || || ||||||||||| || || || Sbjct 61136 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCA 61195 Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175 | || ||| | ||||||||||| | || || | | || || || | ||| | || Sbjct 61196 ATAATGTCACCATGCCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGTTCCCA 61255 Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235 || || | | |||||| | ||||| ||| | | | | |||||| |||| |||||| Sbjct 61256 CCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTA 61315 Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT--ACTTATCGACA 38293 || | || || || || ||||||| ||| || || | |||||| || || | Sbjct 61316 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTCGACACAT--GTA 61373 Query 38294 ATCCTATTCCACCTGCATG-TTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATAT 38351 ||| || ||||| | ||| ||| ||||| ||||| | ||| | ||| || | | | || Sbjct 61374 TTCCAATACCACCAG-ATGCTTTCGATATCAAAGCAGTCTTG-TGTAAAGTCTTATAAAT 61431 Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA---TTTGAGGCAA 38408 ||| || || ||| || | || | | | ||| || |||| |||| | Sbjct 61432 ACCATCAATGGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTAC 61491 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | || ||| || || || ||||| || || || || || | |||| ||| | || Sbjct 61492 T---GTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGAC-ATTA 61547 Query 38469 ATT-ATATGTTTCTATTACATCATCTATATCA------CCGCCGTGAATACCTAGAGATA 38521 ||| ||| || || | ||| | ||||||||| ||||||||| | |||| | Sbjct 61548 ATTGATACGTCTCAAGTACTGCTTCTATATCATTAAATGGTCCGTGAATAGCAAGAGCAA 61607 Query 38522 CCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT----ATTATTCTGTTTAAGTAGA 38577 | ||||| | |||| ||||| |||| || | ||| ||| || || | | | Sbjct 61608 CTCTCATGAACATAAACTGTGGAGTTTC-ATAAGTTTCCTCATTGTTTCTCTTCATCAAA 61666 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCT 38627 |||||||| | |||||| ||||| ||| || | |||| ||||| Sbjct 61667 TACGATTTACAAAGTGTTTTCCAACCAAAGTAAGTAAAATAATAGTCTCT 61716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468518381210240