Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq35 111 1e-19
>seq35
Length=84627
Score = 111 bits (122), Expect = 1e-19
Identities = 422/650 (65%), Gaps = 27/650 (4%)
Strand=Plus/Plus
Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055
||||| ||||||| ||||| || |||| |||||| | ||| || | ||||| ||| |
Sbjct 61076 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAA 61135
Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115
||||| ||| || || |||||| || || ||||||||||| || || ||
Sbjct 61136 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCA 61195
Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175
| || ||| | ||||||||||| | || || | | || || || | ||| | ||
Sbjct 61196 ATAATGTCACCATGCCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGTTCCCA 61255
Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235
|| || | | |||||| | ||||| ||| | | | | |||||| |||| ||||||
Sbjct 61256 CCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTA 61315
Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT--ACTTATCGACA 38293
|| | || || || || ||||||| ||| || || | |||||| || || |
Sbjct 61316 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTCGACACAT--GTA 61373
Query 38294 ATCCTATTCCACCTGCATG-TTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATAT 38351
||| || ||||| | ||| ||| ||||| ||||| | ||| | ||| || | | | ||
Sbjct 61374 TTCCAATACCACCAG-ATGCTTTCGATATCAAAGCAGTCTTG-TGTAAAGTCTTATAAAT 61431
Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA---TTTGAGGCAA 38408
||| || || ||| || | || | | | ||| || |||| |||| |
Sbjct 61432 ACCATCAATGGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTAC 61491
Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468
| || ||| || || || ||||| || || || || || | |||| ||| | ||
Sbjct 61492 T---GTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGAC-ATTA 61547
Query 38469 ATT-ATATGTTTCTATTACATCATCTATATCA------CCGCCGTGAATACCTAGAGATA 38521
||| ||| || || | ||| | ||||||||| ||||||||| | |||| |
Sbjct 61548 ATTGATACGTCTCAAGTACTGCTTCTATATCATTAAATGGTCCGTGAATAGCAAGAGCAA 61607
Query 38522 CCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT----ATTATTCTGTTTAAGTAGA 38577
| ||||| | |||| ||||| |||| || | ||| ||| || || | | |
Sbjct 61608 CTCTCATGAACATAAACTGTGGAGTTTC-ATAAGTTTCCTCATTGTTTCTCTTCATCAAA 61666
Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCT 38627
|||||||| | |||||| ||||| ||| || | |||| |||||
Sbjct 61667 TACGATTTACAAAGTGTTTTCCAACCAAAGTAAGTAAAATAATAGTCTCT 61716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468518381210240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |