Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq65 255 8e-63 seq35 167 3e-36 seq582 158 2e-33 >seq65 Length=9430 Score = 255 bits (282), Expect = 8e-63 Identities = 744/1138 (65%), Gaps = 12/1138 (1%) Strand=Plus/Plus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 ||||||| || || || || | |||||||||||| |||||||| ||||| || || || | Sbjct 6998 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCA 7057 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 7058 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 7117 Query 65932 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 7118 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 7175 Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049 || || |||||| | || || ||||| ||| | | ||| | ||| ||| | Sbjct 7176 ATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTC 7235 Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109 || | | |||| ||||| || ||||| || ||||| || ||| || || ||||| Sbjct 7236 GTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 7295 Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169 | | ||| || || || |||||| | | |||| ||| | | ||||| | Sbjct 7296 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 7355 Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 7356 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 7415 Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| || Sbjct 7416 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 7475 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCC 66349 || || | || || || | | |||||| || ||| | ||| || || || Sbjct 7476 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 7535 Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 7536 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATC 7595 Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 7596 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 7655 Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529 | || || |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 7656 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 7715 Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 7716 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCG 7775 Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 7776 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 7835 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709 |||||| || || |||| ||||| | ||| | ||||| | |||| || | || Sbjct 7836 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTTTC 7895 Query 66710 GTTAACTA---CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766 | || | ||| || | || | ||||| || || || || | ||| | || || Sbjct 7896 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 7952 Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826 ||||| | || | || || || | ||||| ||| | || | |||| ||||| Sbjct 7953 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 8012 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 | || || | || ||||||||||| | | | || ||||| || || || || || Sbjct 8013 CAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 8071 Query 66887 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || ||| | |||| || |||| | || ||||| || || ||||| || | ||| Sbjct 8072 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129 >seq35 Length=84627 Score = 167 bits (184), Expect = 3e-36 Identities = 598/923 (65%), Gaps = 33/923 (4%) Strand=Plus/Plus Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486 ||||| | || | ||||||||| |||||| | ||||| | ||| | | ||||| Sbjct 60449 TCGTAGTGGCCATACTTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATA 60508 Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA- 65544 ||||| || |||| ||||| | || | | || || ||||| || | | || Sbjct 60509 GTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTAC 60566 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 |||| ||||| || ||||| | |||||||||||||||| | | |||| ||||| || Sbjct 60567 AGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGAT 60626 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 | ||| || || |||||||| ||| || ||||||| || ||| ||||| | Sbjct 60627 TGCCTCTTTTTGCCTCCGGAATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCC 60686 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC------TCATC-- 65716 | || | ||||| || ||| | || ||| ||| |||||| ||||| Sbjct 60687 TAACCAACACTTTAACAACACGATGAAGGGTGACAAAGTCAAATACAGGAGAATCATCAG 60746 Query 65717 ----TATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 65769 |||| || || | |||||| || ||||| || ||||| || ||||| || | Sbjct 60747 AAGATATTTTGACGTACGTAGGCAATGCGACTGATGCAAGGTTACAGACTGCTACTTCTT 60806 Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829 | ||| | | || ||| ||||||||| |||| ||| ||||| | Sbjct 60807 CTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGATGACTTAATGACACCTAAGT 60866 Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889 ||| || || ||| | || |||| |||||||||||| ||||| ||| || || | Sbjct 60867 TTTTCTGGTTGGACTTCTCATTGCACGAATCCTTATAAAGCATGAAAGGAACTCCTGTCT 60926 Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTA 65947 | | ||| || || ||| || ||| | | | || || ||| | ||| | | Sbjct 60927 CCGTTTGACTTTGTAGAATTTCTGACCATATTTGTTGCGCTTTCATTTTTTTCATTGGAA 60986 Query 65948 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007 || || || || | || | ||| | || ||| || | | || | || ||| Sbjct 60987 TCAATTCTCGCT--CATACTTTTCATATAGGGTTTTGAATTC-TGTACCATAGCA--GTC 61041 Query 66008 CAAT---CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 || || | |||||| |||| | | ||||| ||| | | || | || || Sbjct 61042 AGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACG 61101 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 || |||||| ||||| |||||||| || || |||||| |||| || || ||| || Sbjct 61102 TTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTC 61161 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 ||||| ||||||| | || | | ||| | ||||| ||| |||||| |||||||| Sbjct 61162 TTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAA 61221 Query 66185 GTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242 |||||| || || | || || |||||||| || || || || | ||||| || ||| Sbjct 61222 GTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTG 61279 Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302 || ||| |||| | || ||| || | | ||||| || |||||||| | ||| |||||| Sbjct 61280 TTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATA 61339 Query 66303 TAGCTTCCACTTGCACGAATATT 66325 || ||| |||| | ||||| Sbjct 61340 TAAGCACCATTTGCCCTTATATT 61362 >seq582 Length=15002 Score = 158 bits (174), Expect = 2e-33 Identities = 570/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| || ||| | |||||||| ||||| |||||||| | || || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||| || |||||||| || | || || || ||| || || || || | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | ||| ||||| |||||||| | ||| ||||||| ||| ||||| || | || Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035 Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 ||| || ||||| || | ||| | |||| ||| || || || ||||| || || Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1976 Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | || | | | | || | | | | | ||||| | || | ||||| || | Sbjct 1975 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACAGGCAA 1917 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | ||| ||| | ||| || ||||| | ||| |||||||| || || || | || |||| Sbjct 1916 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCA 1857 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | | || ||| || | ||| || |||| || || || ||||| || || | |||| Sbjct 1856 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 1797 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCA-C 36340 | || || || || |||| | ||| || |||| | | | |||| | ||||| | Sbjct 1796 CCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATC 1737 Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400 | || ||||| | ||||| | ||| | || || || || || ||||| || | Sbjct 1736 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 1678 Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 36460 | | | || ||| ||| || | || || |||||||| | ||| | || || Sbjct 1677 AACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAG 1618 Query 36461 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 36520 ||||||||||| || ||||| || |||||||| || | || || | ||| || || Sbjct 1617 TGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACC 1558 Query 36521 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 36580 || | | || ||| | || ||||| ||||| || || || || ||||| ||| Sbjct 1557 TCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 1498 Query 36581 GCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCATTG 36637 || | || || ||| || | ||||| | || || || ||||| |||| | Sbjct 1497 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGG 1438 Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697 | ||| || || | ||| | |||||| | |||||||| || ||||| || | ||||| Sbjct 1437 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 1378 Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | |||||| || || || | ||||| |||| ||||| Sbjct 1377 GCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658163783032640