Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq65 255 8e-63
seq35 167 3e-36
seq582 158 2e-33
>seq65
Length=9430
Score = 255 bits (282), Expect = 8e-63
Identities = 744/1138 (65%), Gaps = 12/1138 (1%)
Strand=Plus/Plus
Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871
||||||| || || || || | |||||||||||| |||||||| ||||| || || || |
Sbjct 6998 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCA 7057
Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 7058 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 7117
Query 65932 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989
| | | ||| || | | |||||| ||||| || |||||| ||| || ||
Sbjct 7118 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 7175
Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049
|| || |||||| | || || ||||| ||| | | ||| | ||| ||| |
Sbjct 7176 ATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTC 7235
Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109
|| | | |||| ||||| || ||||| || ||||| || ||| || || |||||
Sbjct 7236 GTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 7295
Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169
| | ||| || || || |||||| | | |||| ||| | | ||||| |
Sbjct 7296 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 7355
Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 7356 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 7415
Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289
||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| ||
Sbjct 7416 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 7475
Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCC 66349
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 7476 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 7535
Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 7536 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATC 7595
Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 7596 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 7655
Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 7656 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 7715
Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 7716 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCG 7775
Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 7776 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 7835
Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
|||||| || || |||| ||||| | ||| | ||||| | |||| || | ||
Sbjct 7836 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTTTC 7895
Query 66710 GTTAACTA---CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766
| || | ||| || | || | ||||| || || || || | ||| | || ||
Sbjct 7896 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 7952
Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826
||||| | || | || || || | ||||| ||| | || | |||| |||||
Sbjct 7953 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 8012
Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886
| || || | || ||||||||||| | | | || ||||| || || || || ||
Sbjct 8013 CAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 8071
Query 66887 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943
|| ||| | |||| || |||| | || ||||| || || ||||| || | |||
Sbjct 8072 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129
>seq35
Length=84627
Score = 167 bits (184), Expect = 3e-36
Identities = 598/923 (65%), Gaps = 33/923 (4%)
Strand=Plus/Plus
Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486
||||| | || | ||||||||| |||||| | ||||| | ||| | | |||||
Sbjct 60449 TCGTAGTGGCCATACTTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATA 60508
Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA- 65544
||||| || |||| ||||| | || | | || || ||||| || | | ||
Sbjct 60509 GTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTAC 60566
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
|||| ||||| || ||||| | |||||||||||||||| | | |||| ||||| ||
Sbjct 60567 AGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGAT 60626
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
| ||| || || |||||||| ||| || ||||||| || ||| ||||| |
Sbjct 60627 TGCCTCTTTTTGCCTCCGGAATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCC 60686
Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC------TCATC-- 65716
| || | ||||| || ||| | || ||| ||| |||||| |||||
Sbjct 60687 TAACCAACACTTTAACAACACGATGAAGGGTGACAAAGTCAAATACAGGAGAATCATCAG 60746
Query 65717 ----TATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 65769
|||| || || | |||||| || ||||| || ||||| || ||||| || |
Sbjct 60747 AAGATATTTTGACGTACGTAGGCAATGCGACTGATGCAAGGTTACAGACTGCTACTTCTT 60806
Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829
| ||| | | || ||| ||||||||| |||| ||| ||||| |
Sbjct 60807 CTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGATGACTTAATGACACCTAAGT 60866
Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889
||| || || ||| | || |||| |||||||||||| ||||| ||| || || |
Sbjct 60867 TTTTCTGGTTGGACTTCTCATTGCACGAATCCTTATAAAGCATGAAAGGAACTCCTGTCT 60926
Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTA 65947
| | ||| || || ||| || ||| | | | || || ||| | ||| | |
Sbjct 60927 CCGTTTGACTTTGTAGAATTTCTGACCATATTTGTTGCGCTTTCATTTTTTTCATTGGAA 60986
Query 65948 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007
|| || || || | || | ||| | || ||| || | | || | || |||
Sbjct 60987 TCAATTCTCGCT--CATACTTTTCATATAGGGTTTTGAATTC-TGTACCATAGCA--GTC 61041
Query 66008 CAAT---CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064
|| || | |||||| |||| | | ||||| ||| | | || | || ||
Sbjct 61042 AGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACG 61101
Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124
|| |||||| ||||| |||||||| || || |||||| |||| || || ||| ||
Sbjct 61102 TTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTC 61161
Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184
||||| ||||||| | || | | ||| | ||||| ||| |||||| ||||||||
Sbjct 61162 TTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAA 61221
Query 66185 GTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242
|||||| || || | || || |||||||| || || || || | ||||| || |||
Sbjct 61222 GTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTG 61279
Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302
|| ||| |||| | || ||| || | | ||||| || |||||||| | ||| ||||||
Sbjct 61280 TTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATA 61339
Query 66303 TAGCTTCCACTTGCACGAATATT 66325
|| ||| |||| | |||||
Sbjct 61340 TAAGCACCATTTGCCCTTATATT 61362
>seq582
Length=15002
Score = 158 bits (174), Expect = 2e-33
Identities = 570/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
||||| || |||||||| || | || || || ||| || || || || |
Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
| ||| ||||| |||||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035
Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
||| || ||||| || | ||| | |||| ||| || || || ||||| || ||
Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1976
Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164
| || | | | | || | | | | | ||||| | || | ||||| || |
Sbjct 1975 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACAGGCAA 1917
Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224
| ||| ||| | ||| || ||||| | ||| |||||||| || || || | || ||||
Sbjct 1916 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCA 1857
Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284
| | || ||| || | ||| || |||| || || || ||||| || || | ||||
Sbjct 1856 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 1797
Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCA-C 36340
| || || || || |||| | ||| || |||| | | | |||| | ||||| |
Sbjct 1796 CCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATC 1737
Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400
| || ||||| | ||||| | ||| | || || || || || ||||| || |
Sbjct 1736 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 1678
Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 36460
| | | || ||| ||| || | || || |||||||| | ||| | || ||
Sbjct 1677 AACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAG 1618
Query 36461 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 36520
||||||||||| || ||||| || |||||||| || | || || | ||| || ||
Sbjct 1617 TGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACC 1558
Query 36521 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 36580
|| | | || ||| | || ||||| ||||| || || || || ||||| |||
Sbjct 1557 TCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 1498
Query 36581 GCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCATTG 36637
|| | || || ||| || | ||||| | || || || ||||| |||| |
Sbjct 1497 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGG 1438
Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697
| ||| || || | ||| | |||||| | |||||||| || ||||| || | |||||
Sbjct 1437 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 1378
Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| |||||| || || || | ||||| |||| |||||
Sbjct 1377 GCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658163783032640
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