Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq582 105 7e-18 >seq582 Length=15002 Score = 105 bits (116), Expect = 7e-18 Identities = 318/485 (66%), Gaps = 17/485 (4%) Strand=Plus/Plus Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624 |||||| | | ||||| | | |||||| ||||| |||| | ||| ||| | Sbjct 1716 AAAAGGCTCAATGGGCCATTAGATGGATTCGTGACGACGAAGCTCTATATGCTGAAAGAT 1775 Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684 |||| ||||| ||| ||||||||||||||||| || ||| || || || || || | Sbjct 1776 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCT 1835 Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744 | || | ||| | ||||| || | || || ||||| ||||| | | | Sbjct 1836 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACATTCTCAAACGAATTGATTTGCAGAG 1895 Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTT-GTATT--ATAATACGCGCGTTAAAGAAA 52801 | ||||| ||||||| || ||||| ||||| |||| || || || ||||| Sbjct 1896 ATGAAGGTTTGCACACCGACTTTGCCTGTTTACTATTCCATCAT-------TTGAAGAAC 1948 Query 52802 AATTGTCATATGAAAAAATTCTAGA---CATGTTTAAAGAGGCCGTCGACATTGAAAA-A 52857 || | || || ||| ||| | || || | | ||| || || || || ||||| | Sbjct 1949 AA--GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAAAAGA 2006 Query 52858 GAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGC 52917 || | || | |||||| ||||||| || | ||||| |||||||| ||||| | Sbjct 2007 GA-TACTTCATTGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAAC 2065 Query 52918 GAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTAT 52977 | ||| |||| |||||||| |||||||| || | | ||| | ||||||||| Sbjct 2066 CAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAATACTAC 2125 Query 52978 AATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTT 53037 || | |||||| || |||||| | ||||| || | | || ||||| || || Sbjct 2126 AACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTC 2185 Query 53038 TTCGA 53042 ||||| Sbjct 2186 TTCGA 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057203923200