Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq582 172 5e-38
>seq582
Length=15002
Score = 172 bits (190), Expect = 5e-38
Identities = 555/846 (66%), Gaps = 23/846 (3%)
Strand=Plus/Minus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| ||||| ||||| || |||||||| ||| || || ||||||||||| || |||
Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140
Query 13656 GGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714
|| || | |||| | | ||| | ||||| | | |||| ||| || ||||
Sbjct 2139 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 2081
Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774
||| || | ||||| ||| |||||| |||||||| | ||| || || ||
Sbjct 2080 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGG---TAG 2024
Query 13775 ATTGGTTAA--AAAT-TCT-TTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAA 13830
| | | || || | ||| ||||| || ||||| ||| | || || || | ||
Sbjct 2023 AGCG-TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAA 1965
Query 13831 TCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATG 13888
||| || || | | || | | ||| | || | |||||| ||||| || ||
Sbjct 1964 TCT--TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTG 1907
Query 13889 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13948
| || |||||||| | ||| | ||||||||| ||||| || ||||||||||| ||
Sbjct 1906 CAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTT 1847
Query 13949 tttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGC 14008
|| || ||||| || || ||||| || || || || || || | || || || |||||
Sbjct 1846 CTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1787
Query 14009 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCC 14067
||||| | |||| ||| || | |||| | || ||| |||||| | | ||||
Sbjct 1786 GAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGA-ATCCATCTAATGGCCC 1728
Query 14068 ATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCT 14127
||| || |||| ||| || || |||||||| ||||| || || | || | ||
Sbjct 1727 ATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCT 1668
Query 14128 CTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTT 14185
| |||| | |||| ||||| || ||||| | || ||| | || ||||| |||||
Sbjct 1667 CCTTAGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTT 1610
Query 14186 TTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTA 14245
|||||| || || ||||| || ||||| | ||||| | ||| || || | | |
Sbjct 1609 TTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGA 1550
Query 14246 AAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATAT 14305
|| |||| |||| ||||| || || |||||||| ||| ||||| || || | |
Sbjct 1549 GAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCAC 1490
Query 14306 GTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTT 14362
| || || || ||| | | ||| | | || ||||| || | ||||||
Sbjct 1489 TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTT 1430
Query 14363 AGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCA 14422
|| | ||| | ||| ||| | ||||||||| || | ||| | ||||| | ||||
Sbjct 1429 GGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCA 1370
Query 14423 TATTTC 14428
|||||
Sbjct 1369 GATTTC 1364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479721427726400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |