Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq582 172 5e-38 >seq582 Length=15002 Score = 172 bits (190), Expect = 5e-38 Identities = 555/846 (66%), Gaps = 23/846 (3%) Strand=Plus/Minus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| ||||| ||||| || |||||||| ||| || || ||||||||||| || ||| Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140 Query 13656 GGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714 || || | |||| | | ||| | ||||| | | |||| ||| || |||| Sbjct 2139 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 2081 Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774 ||| || | ||||| ||| |||||| |||||||| | ||| || || || Sbjct 2080 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGG---TAG 2024 Query 13775 ATTGGTTAA--AAAT-TCT-TTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAA 13830 | | | || || | ||| ||||| || ||||| ||| | || || || | || Sbjct 2023 AGCG-TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAA 1965 Query 13831 TCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATG 13888 ||| || || | | || | | ||| | || | |||||| ||||| || || Sbjct 1964 TCT--TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTG 1907 Query 13889 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13948 | || |||||||| | ||| | ||||||||| ||||| || ||||||||||| || Sbjct 1906 CAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTT 1847 Query 13949 tttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGC 14008 || || ||||| || || ||||| || || || || || || | || || || ||||| Sbjct 1846 CTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1787 Query 14009 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCC 14067 ||||| | |||| ||| || | |||| | || ||| |||||| | | |||| Sbjct 1786 GAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGA-ATCCATCTAATGGCCC 1728 Query 14068 ATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCT 14127 ||| || |||| ||| || || |||||||| ||||| || || | || | || Sbjct 1727 ATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCT 1668 Query 14128 CTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTT 14185 | |||| | |||| ||||| || ||||| | || ||| | || ||||| ||||| Sbjct 1667 CCTTAGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTT 1610 Query 14186 TTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTA 14245 |||||| || || ||||| || ||||| | ||||| | ||| || || | | | Sbjct 1609 TTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGA 1550 Query 14246 AAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATAT 14305 || |||| |||| ||||| || || |||||||| ||| ||||| || || | | Sbjct 1549 GAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCAC 1490 Query 14306 GTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTT 14362 | || || || ||| | | ||| | | || ||||| || | |||||| Sbjct 1489 TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTT 1430 Query 14363 AGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCA 14422 || | ||| | ||| ||| | ||||||||| || | ||| | ||||| | |||| Sbjct 1429 GGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCA 1370 Query 14423 TATTTC 14428 ||||| Sbjct 1369 GATTTC 1364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479721427726400