Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq582 154 1e-32 >seq582 Length=15002 Score = 154 bits (170), Expect = 1e-32 Identities = 543/841 (65%), Gaps = 13/841 (2%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| ||||| || || || |||||||| ||| || || ||||||||||| |||||| Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140 Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502 || || || ||| | | ||| | ||||| | | | || ||| || |||| Sbjct 2139 GGGTTAGT-GACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 2081 Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13562 ||| || | ||||| ||| |||||| |||||||| | ||| || || | Sbjct 2080 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 2021 Query 13563 ATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTC 13622 | | | || || ||||| || ||||| || | || || | | | ||| | Sbjct 2020 GTCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT- 1962 Query 13623 ATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13680 || || | | || | | ||| | || | |||||| ||||| || || | Sbjct 1961 -TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAA 1903 Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || |||||||| | ||| | ||||||||| ||||| || ||||||||||| || || Sbjct 1902 CCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTC 1843 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || || |||||||| || || || || || | || || || ||||| ||| Sbjct 1842 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1783 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 || | | || ||| || | |||| | || |||||| | | ||||||| | Sbjct 1782 GCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATCTAATGGCCCATTGA 1723 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920 | |||| ||| || || ||||| || ||||| || || || | ||| ||| Sbjct 1722 GCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCTTA 1663 Query 13921 G--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTA 13978 | | |||| ||||| || ||||| | || ||| | || ||||| |||||||| | Sbjct 1662 GGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCA 1605 Query 13979 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATC 14038 | || || ||||| || || || | ||||||| ||| ||||| | | | || Sbjct 1604 TCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGT 1545 Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098 |||| |||||||||| || || |||||||| ||| ||||| || || | | | Sbjct 1544 TTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGG 1485 Query 14099 TAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAA 14155 || || || ||| | | ||| | | || ||||| || | |||||| || | Sbjct 1484 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGACA 1425 Query 14156 GATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTT 14215 ||| | ||| ||| | ||||||||| || | ||| | ||||| | |||| |||| Sbjct 1424 AATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCAGATTT 1365 Query 14216 C 14216 | Sbjct 1364 C 1364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478582243333440