Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq582 154 1e-32
>seq582
Length=15002
Score = 154 bits (170), Expect = 1e-32
Identities = 543/841 (65%), Gaps = 13/841 (2%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| ||||| || || || |||||||| ||| || || ||||||||||| ||||||
Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140
Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502
|| || || ||| | | ||| | ||||| | | | || ||| || ||||
Sbjct 2139 GGGTTAGT-GACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 2081
Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13562
||| || | ||||| ||| |||||| |||||||| | ||| || || |
Sbjct 2080 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 2021
Query 13563 ATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTC 13622
| | | || || ||||| || ||||| || | || || | | | ||| |
Sbjct 2020 GTCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT- 1962
Query 13623 ATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13680
|| || | | || | | ||| | || | |||||| ||||| || || |
Sbjct 1961 -TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAA 1903
Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740
|| |||||||| | ||| | ||||||||| ||||| || ||||||||||| || ||
Sbjct 1902 CCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTC 1843
Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800
|| ||||| || || |||||||| || || || || || | || || || ||||| |||
Sbjct 1842 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1783
Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860
|| | | || ||| || | |||| | || |||||| | | ||||||| |
Sbjct 1782 GCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATCTAATGGCCCATTGA 1723
Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920
| |||| ||| || || ||||| || ||||| || || || | ||| |||
Sbjct 1722 GCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCTTA 1663
Query 13921 G--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTA 13978
| | |||| ||||| || ||||| | || ||| | || ||||| |||||||| |
Sbjct 1662 GGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCA 1605
Query 13979 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATC 14038
| || || ||||| || || || | ||||||| ||| ||||| | | | ||
Sbjct 1604 TCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGT 1545
Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098
|||| |||||||||| || || |||||||| ||| ||||| || || | | |
Sbjct 1544 TTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGG 1485
Query 14099 TAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAA 14155
|| || || ||| | | ||| | | || ||||| || | |||||| || |
Sbjct 1484 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGACA 1425
Query 14156 GATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTT 14215
||| | ||| ||| | ||||||||| || | ||| | ||||| | |||| ||||
Sbjct 1424 AATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCAGATTT 1365
Query 14216 C 14216
|
Sbjct 1364 C 1364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478582243333440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |