Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq65 232 9e-56 seq35 158 2e-33 seq582 149 8e-31 >seq65 Length=9430 Score = 232 bits (256), Expect = 9e-56 Identities = 741/1140 (65%), Gaps = 16/1140 (1%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| || || || || | |||||||||||| |||||||| ||||| || || || | Sbjct 6998 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCA 7057 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || || ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 7058 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 7117 Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951 | | | || | || | | |||||| ||||| || || ||| ||| || || Sbjct 7118 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 7175 Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 || || || ||| || || || |||||| ||| | | ||| | ||| ||| | Sbjct 7176 ATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTC 7235 Query 72012 ATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 72069 | || ||| |||| ||||| || ||||| || ||||| || ||| || | ||| Sbjct 7236 GT--TCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 7293 Query 72070 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 72129 || | | || || || || |||||| | | |||| ||| | | ||||| Sbjct 7294 CTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCT 7353 Query 72130 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCT 72189 || ||||| || || | ||| | ||| | | || || | ||||| || || || || Sbjct 7354 GAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCA 7413 Query 72190 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCA 72249 | ||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| Sbjct 7414 ACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCG 7473 Query 72250 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCC 72309 || || || | || || || | | |||||| ||| ||| | ||| || || Sbjct 7474 TTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCA 7533 Query 72310 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 72369 || || | |||||||| | || ||| || || || || || || || || || | Sbjct 7534 CCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAA 7593 Query 72370 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 72429 || ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| Sbjct 7594 TCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTG 7653 Query 72430 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA 72489 || | || || |||||||| || || || || ||||| ||| ||||| || || | | Sbjct 7654 AAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAA 7713 Query 72490 GCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGT 72549 | ||| ||||| | || || || || || || | ||| | ||| || ||||| Sbjct 7714 ACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGG 7773 Query 72550 CTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 72609 | |||| | | ||| || ||| | | |||||| || |||||| || || ||||| Sbjct 7774 CGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCG 7833 Query 72610 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATAT 72669 || |||||| || || |||| ||||| | ||| | || || | |||| || | | Sbjct 7834 AAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTT 7893 Query 72670 TTGTTAACTAT---ATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTA 72726 | | || || || || | || | ||||| || || || || | ||| | || Sbjct 7894 TCCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTT 7950 Query 72727 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTG 72786 || || || | || | || || || | ||||| ||| | || | |||| |||| Sbjct 7951 GGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTG 8010 Query 72787 TGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTA 72846 || | || || | || ||||| ||||| | | | || |||||||| || || || Sbjct 8011 TGCAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT- 8069 Query 72847 CAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || ||| | |||| || |||| | || ||||| || || ||||| || | ||| Sbjct 8070 CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129 >seq35 Length=84627 Score = 158 bits (174), Expect = 2e-33 Identities = 594/917 (65%), Gaps = 31/917 (3%) Strand=Plus/Plus Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432 |||||||| | | ||||| | || | || || || |||||| | ||||| | Sbjct 60433 TGATCCTGGGAAACTTTCGTAGTGGCCATACTTCTCAGCGAGTTCAATAGATGCCTCAAT 60492 Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491 ||| ||| ||||| ||||| || |||| ||||| | || | | || || | Sbjct 60493 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 60551 Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550 |||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | | Sbjct 60552 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 60610 Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610 |||| |||||| ||| ||| || || |||||||| ||| || ||||||| Sbjct 60611 GGTCGGTGTCTTAGATTGCCTCTTTTTGCCTCCGGAATAGGGTAAGCTCCAACATCTATA 60670 Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670 || ||| ||||| || || | ||||| || ||| | || ||| ||| |||||| Sbjct 60671 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGGGTGACAAAGTCAAAT 60730 Query 71671 CTCC------CATC------TATTACAAAC-ACGTT--CAAGGCAACAGATGCCAGATTA 71715 |||| |||| | |||| ||| || || ||||| || ||| Sbjct 60731 ACAGGAGAATCATCAGAAGATATTTTGACGTACGTAGGCAATGCGACTGATGCAAGGTTA 60790 Query 71716 CAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACAC 71775 || || ||||| || | | ||| | | |||||| ||||||||| || Sbjct 60791 CAGACTGCTACTTCTTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGATGAC 60850 Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835 || ||| ||||| |||| || || ||| | || |||| |||||||||||| || Sbjct 60851 TTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCACGAATCCTTATAAAGCATG 60910 Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895 || ||| || || || | ||| || || ||| || ||| | | | || || Sbjct 60911 AAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCTGACCATATTTGTTGCGCTTTC 60970 Query 71896 ATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 ||| | ||| ||| | || ||||| || || | | ||||| || ||| || | Sbjct 60971 ATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAATTC-TG 61028 Query 71955 TCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 | || |||| ||| ||| || | ||||| |||| | | ||||| ||| | Sbjct 61029 TACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTC 61086 Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071 || || | || |||| |||||| ||||| |||||||| || || ||||| |||| Sbjct 61087 ATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCG 61146 Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131 || || || || ||||| ||||||| | || | | ||| | ||||| ||| Sbjct 61147 GGCCCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACC 61206 Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGATCT 72189 |||||| |||||||||||||| || || | || || |||||||| || || || || Sbjct 61207 ATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCG 61264 Query 72190 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCA 72249 | ||||| || ||||| ||| |||| | || ||| || | | ||||| || | |||| Sbjct 61265 ACATATCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCA 61324 Query 72250 TTGGTCCCGGAGATATA 72266 || | ||| |||||||| Sbjct 61325 TTCGACCCTGAGATATA 61341 >seq582 Length=15002 Score = 149 bits (164), Expect = 8e-31 Identities = 571/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || ||| | |||||||| ||||| || || || |||| || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || || || || || || ||| || || || || | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | || Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| || | ||| | |||| ||| || || || ||||| || || Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1976 Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068 |||| || | | | | || | | | | | ||||| | || | ||||| | Sbjct 1975 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACAGG 1920 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | || ||| ||||| ||| |||||||| | ||| |||||||| || || || | || | Sbjct 1919 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTG 1860 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 |||| | || ||| || | ||| || || | || || || ||||| || || | | Sbjct 1859 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACAC 1800 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCC 42245 |||| || || || || |||| | ||| || |||| | | | |||| | |||| Sbjct 1799 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCC 1740 Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 | || || ||||| | ||||| | ||| | || || ||||| |||||||| || Sbjct 1739 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 1681 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 | | | | || ||| ||| || | || || || ||||| | ||| | || Sbjct 1680 AAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCG 1621 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || ||||||||||| || || || || |||||||| || |||| || | || || Sbjct 1620 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGC 1561 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 || || | | || ||| | || ||||||||||| || || || || ||||| Sbjct 1560 ACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 1501 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540 ||||| | || || ||| || | |||| | ||| || || ||||| || Sbjct 1500 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 1442 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || || ||| || || | ||| | |||||| | |||||||| || || || || | || Sbjct 1441 ATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 1382 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||| | |||||| || || || | |||||||||| ||||| Sbjct 1381 ATAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130005392960