Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq582 118 1e-21
>seq582
Length=15002
Score = 118 bits (130), Expect = 1e-21
Identities = 296/438 (68%), Gaps = 19/438 (4%)
Strand=Plus/Plus
Query 50410 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50469
|| ||| | || || ||||| || || |||||||||||||| || ||| ||| ||
Sbjct 1766 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 1825
Query 50470 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50529
||||| || | | || | || | ||||| || | || || ||||| |||
Sbjct 1826 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACATTCTCAAACGAATTG 1885
Query 50530 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50589
|||| | || ||||| ||||||| |||||||| ||||| || || | | |
Sbjct 1886 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTT-----ACTATTCCATCATT 1940
Query 50590 AATGAAAAATTATC-ATACGAAACAATTTTGGACA---TGTTCAAAGAAGCCGTCGACAT 50645
|||| || | | | | || ||| | || | | ||| |||||| || || ||
Sbjct 1941 --TGAAGAACAAGCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGAT 1998
Query 50646 CGAAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACA 50704
|||||| ||| | |||| |||||| ||||||| | | ||||| |||||||| ||
Sbjct 1999 CGAAAA-GAGATACTTCATTGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATT 2057
Query 50705 TGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACC 50762
||||| | | ||| | || ||||||||||||||| | | ||||| || ||||
Sbjct 2058 TGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA-- 2115
Query 50763 GAAATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCA 50821
||||||||| || | ||| |||||| || |||||| | ||||| || |||| || |
Sbjct 2116 GAAATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTA 2174
Query 50822 AAACAAACTTTTTCGAAA 50839
|||| || || |||||||
Sbjct 2175 AAACCAATTTCTTCGAAA 2192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507007453902720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |