Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq582 174 1e-38
>seq582
Length=15002
Score = 174 bits (192), Expect = 1e-38
Identities = 545/834 (65%), Gaps = 29/834 (3%)
Strand=Plus/Minus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| ||||| || || || ||||| || | || ||||| ||||||||||| |||||
Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140
Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994
|| || | |||||||| || ||||| | | | | |||||| ||||||
Sbjct 2139 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 2080
Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054
|| || | ||| || ||||| |||||| |||||| || | || || || | |||
Sbjct 2079 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 2020
Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC 13114
|| | || | | ||||| || ||||| ||||| | | || |||| || ||
Sbjct 2019 TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1963
Query 13115 TCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTGC 13168
| | ||| | ||| | | ||| | || | | ||| ||||| || ||||
Sbjct 1962 TTT---GGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGC 1906
Query 13169 AATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCCCTCG 13227
|| ||||||||||| | || | |||||||| ||||| | ||| ||||| || ||||
Sbjct 1905 AAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTC 1846
Query 13228 TTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGC 13287
|| || || ||| || || ||||| || ||||| || ||||| | ||||| || || ||
Sbjct 1845 TTCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1787
Query 13288 AAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC-TATCCACTTTCTGGCCC 13346
||||| | ||| |||||| |||| | || | || | ||||| | ||||||
Sbjct 1786 GAACGCAACCAATCTTTCAGCATATAGA-GCTTCGTCGTCACGAATCCATCTAATGGCCC 1728
Query 13347 AGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttttt 13406
| | || |||| ||| | || |||| || || || || || | | | |
Sbjct 1727 ATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCT 1668
Query 13407 CCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTT 13466
||||| || || ||||| || ||||| || ||| | || || ||||| ||||
Sbjct 1667 CCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTT 1608
Query 13467 CCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAA 13526
||||| ||||||||||| || || || | || |||| | || || || | | | |
Sbjct 1607 CCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGA 1548
Query 13527 ATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TA 13583
| |||| | ||||||||||| || || || || ||||||||| || ||||| |
Sbjct 1547 AGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTC 1488
Query 13584 TGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATC 13638
|| | | |||| | || ||||| ||||| || ||| || | | |||
Sbjct 1487 TGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATGGAGATC 1433
Query 13639 TTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692
|| || ||||| | || ||| | ||||||||||| || | || |||||||
Sbjct 1432 CTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430976643152592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |