Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq582 174 1e-38 >seq582 Length=15002 Score = 174 bits (192), Expect = 1e-38 Identities = 545/834 (65%), Gaps = 29/834 (3%) Strand=Plus/Minus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| || || || ||||| || | || ||||| ||||||||||| ||||| Sbjct 2199 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 2140 Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994 || || | |||||||| || ||||| | | | | |||||| |||||| Sbjct 2139 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 2080 Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054 || || | ||| || ||||| |||||| |||||| || | || || || | ||| Sbjct 2079 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 2020 Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC 13114 || | || | | ||||| || ||||| ||||| | | || |||| || || Sbjct 2019 TCAATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1963 Query 13115 TCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTGC 13168 | | ||| | ||| | | ||| | || | | ||| ||||| || |||| Sbjct 1962 TTT---GGATCTGGCTTGTTCTTCAAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGC 1906 Query 13169 AATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCCCTCG 13227 || ||||||||||| | || | |||||||| ||||| | ||| ||||| || |||| Sbjct 1905 AAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTC 1846 Query 13228 TTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGC 13287 || || || ||| || || ||||| || ||||| || ||||| | ||||| || || || Sbjct 1845 TTCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1787 Query 13288 AAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC-TATCCACTTTCTGGCCC 13346 ||||| | ||| |||||| |||| | || | || | ||||| | |||||| Sbjct 1786 GAACGCAACCAATCTTTCAGCATATAGA-GCTTCGTCGTCACGAATCCATCTAATGGCCC 1728 Query 13347 AGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttttt 13406 | | || |||| ||| | || |||| || || || || || | | | | Sbjct 1727 ATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCT 1668 Query 13407 CCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTT 13466 ||||| || || ||||| || ||||| || ||| | || || ||||| |||| Sbjct 1667 CCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTT 1608 Query 13467 CCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAA 13526 ||||| ||||||||||| || || || | || |||| | || || || | | | | Sbjct 1607 CCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGA 1548 Query 13527 ATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TA 13583 | |||| | ||||||||||| || || || || ||||||||| || ||||| | Sbjct 1547 AGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTC 1488 Query 13584 TGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATC 13638 || | | |||| | || ||||| ||||| || ||| || | | ||| Sbjct 1487 TGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATGGAGATC 1433 Query 13639 TTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692 || || ||||| | || ||| | ||||||||||| || | || ||||||| Sbjct 1432 CTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430976643152592