Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq582 158 3e-33
seq493 140 7e-28
seq689 120 7e-22
>seq582
Length=15002
Score = 158 bits (174), Expect = 3e-33
Identities = 366/546 (67%), Gaps = 8/546 (1%)
Strand=Plus/Plus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGA-CTTAATAGATTG 268812
|||| || ||||||||||||| |||||| | ||| |||| | || || || || ||
Sbjct 1388 GCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTCCAT-GACTG 1446
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || ||| |||| || ||| || || || | |||||||| |||||
Sbjct 1447 GAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGC 1506
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||||||||||| |||||||| | || || || |||| ||||| || ||
Sbjct 1507 TGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCCGCTGAGGTGCAAAT 1566
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| ||||||| || || ||||| ||||| || || ||||| ||||| || ||||
Sbjct 1567 TCCAGAAGCCAAGTGCTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAGAC 1626
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
|| | || || || ||||| || | ||| || || | | | ||
Sbjct 1627 TTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAGCACGAGTTCTTGTTGAA 1686
Query 269050 TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAA- 269108
| | || ||| || | | | |||| || ||||||| | | ||||||
Sbjct 1687 TGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCG 1746
Query 269109 --ACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166
|||| || | || | ||||| || ||||| || || || || |||||| | ||
Sbjct 1747 TGACGACGAAGCTCTATATGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTT 1806
Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226
|| || || || || || || ||||| ||||||||||| | || | |||||||| ||
Sbjct 1807 TTTCTCTGGTTCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTT 1866
Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286
|| ||||| ||||||||||| |||| || |||||||| ||| |||||| || |||||
Sbjct 1867 GACATTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTT 1926
Query 269287 ATTATT 269292
| ||||
Sbjct 1927 ACTATT 1932
>seq493
Length=23338
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||| ||||| | ||| || |||
Sbjct 23322 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCA 23263
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || ||||| || ||||| || ||||| || || || ||||| | ||
Sbjct 23262 GCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 23203
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || | ||||||||||||||||| || ||
Sbjct 23202 ACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTC 23143
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 23142 TTGACGAAAATTTGCAT 23126
>seq689
Length=43288
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || | || | || | || ||||| || || || || ||||||
Sbjct 11457 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 11398
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||||||||||||| | ||| || |||||||| || | || ||||| || ||
Sbjct 11397 GACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 11338
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | || ||||| || | ||| || || |||
Sbjct 11337 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCG 11278
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 11277 ACTTCCAAAGTGATGGTCTTACCAGT 11252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151382231487968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |