Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq65 269 3e-67 seq582 179 5e-40 seq35 129 7e-25 >seq65 Length=9430 Score = 269 bits (298), Expect = 3e-67 Identities = 747/1138 (66%), Gaps = 12/1138 (1%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||||||||| || || || | |||||||||||| |||||||| ||||| || || || | Sbjct 6998 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCA 7057 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 7058 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 7117 Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | | ||| || | | | |||||| ||||| || |||||| ||| || || Sbjct 7118 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 7175 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || |||||| | || || ||||| ||| | | ||| | ||| ||| | Sbjct 7176 ATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTC 7235 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || | | |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 7236 GTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 7295 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | | ||| || || || |||||| | | |||| ||| | | ||||| || Sbjct 7296 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 7355 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 7356 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 7415 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| || Sbjct 7416 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 7475 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 ||||| | || || || | | |||||| || ||| | ||| || || || Sbjct 7476 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 7535 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | |||||||| | || ||| || || ||||| || ||||| || || ||| Sbjct 7536 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATC 7595 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 7596 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 7655 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685 | || || |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 7656 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 7715 Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 7716 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCG 7775 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 7776 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 7835 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865 |||||| || || |||| ||||| | ||| | ||||| | |||| || | || Sbjct 7836 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTTTC 7895 Query 63866 GTTAACTAT---ATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 63922 | || || || || | || | ||||| || || || || | ||| | || || Sbjct 7896 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 7952 Query 63923 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 63982 || || | || | || || || | ||||| ||| | || | |||| |||||| Sbjct 7953 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 8012 Query 63983 TAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 64042 | || || | || ||||| ||||| | | | || ||||| || || || || || Sbjct 8013 CAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 8071 Query 64043 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64099 || ||| | |||| || |||| | || ||||| || || ||||| || | ||| Sbjct 8072 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129 >seq582 Length=15002 Score = 179 bits (198), Expect = 5e-40 Identities = 575/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || ||| | |||||||| ||||| ||||| || |||| || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || || || || || || || ||| || || || || | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | ||| || || || ||||| | ||| ||||||| ||| ||||| || | || Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 ||| || ||||| || | ||| | |||| ||| || || || ||||| || || Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1976 Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | || | | | | || | | | | | ||||| | || | ||||| || | Sbjct 1975 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACAGGCAA 1917 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | ||| ||||| ||| || ||||| | ||| | |||||| || || || | || |||| Sbjct 1916 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCA 1857 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | | || ||| || | ||| || |||| |||||| || ||||| || || | |||| Sbjct 1856 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 1797 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA-C 33486 | || ||||| || |||| | ||| || |||| | | || |||| | ||||| | Sbjct 1796 CCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATC 1737 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || ||||| | ||||| | ||| | || || ||||| |||||||| || | Sbjct 1736 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 1678 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 | | | || ||| ||| || | ||||| || ||||| | ||| | || || Sbjct 1677 AACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAG 1618 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 ||||||||||| || || || || |||||||| || | || || | ||| || || Sbjct 1617 TGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACC 1558 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | || |||| |||| ||||| ||||| || || || || ||||| ||| Sbjct 1557 TCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 1498 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGT-CTGGTG--TTAGTTTATTCCAATCATTG 33783 || | || || ||| || | |||| || || || || ||||| |||| | Sbjct 1497 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGG 1438 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | ||| || || | ||| | |||||| | |||||||| || ||||| || | ||||| Sbjct 1437 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 1378 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | |||||| || | || | ||||||||||| ||||| Sbjct 1377 GCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 >seq35 Length=84627 Score = 129 bits (142), Expect = 7e-25 Identities = 577/902 (64%), Gaps = 33/902 (4%) Strand=Plus/Plus Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642 ||||| | || | ||||||||| |||||| | ||||| | ||| | | ||||| Sbjct 60449 TCGTAGTGGCCATACTTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATA 60508 Query 62643 GTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA- 62700 ||||| || |||| ||||| | || | | || || ||||| || | | || Sbjct 60509 GTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTAC 60566 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 |||| ||||| || || || | |||||||||||||||| | | |||| ||||| || Sbjct 60567 AGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGAT 60626 Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820 | ||| || || |||||||| ||| || ||||||| || ||| ||||| | Sbjct 60627 TGCCTCTTTTTGCCTCCGGAATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCC 60686 Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC------CATC-- 62872 | || | ||||| || ||| | || ||| ||| |||||| |||| Sbjct 60687 TAACCAACACTTTAACAACACGATGAAGGGTGACAAAGTCAAATACAGGAGAATCATCAG 60746 Query 62873 ----TATT---ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62925 |||| || || | ||| || || ||||| || ||||| || ||||| || | Sbjct 60747 AAGATATTTTGACGTACGTAGGCAATGCGACTGATGCAAGGTTACAGACTGCTACTTCTT 60806 Query 62926 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAAT 62985 | ||| | | || ||| ||||||||| |||| || ||||| | Sbjct 60807 CTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGATGACTTAATGACACCTAAGT 60866 Query 62986 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 63045 ||| || || ||| | || |||| |||||||||||| ||||| ||| || || | Sbjct 60867 TTTTCTGGTTGGACTTCTCATTGCACGAATCCTTATAAAGCATGAAAGGAACTCCTGTCT 60926 Query 63046 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTA 63103 | | ||| || || ||| || ||| | | | || || ||| | ||| | | Sbjct 60927 CCGTTTGACTTTGTAGAATTTCTGACCATATTTGTTGCGCTTTCATTTTTTTCATTGGAA 60986 Query 63104 TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63163 || ||||| || || | ||| | || ||| || | | || | || ||| Sbjct 60987 TCAA--TTCTCGCTCATACTTTTCATATAGGGTTTTGAATTC-TGTACCATAGCA--GTC 61041 Query 63164 CAAT---CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63220 || || | |||||| |||| | | ||||| ||| | | || | || || Sbjct 61042 AGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACG 61101 Query 63221 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280 || |||||| ||||| |||||||| || || ||||| |||| || || ||| || Sbjct 61102 TTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTC 61161 Query 63281 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63340 ||||| ||||||| | || | | ||| | ||||| ||| |||||| |||||||| Sbjct 61162 TTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAA 61221 Query 63341 GTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398 |||||| || || | || || |||||||| || || || || | ||||| || ||| Sbjct 61222 GTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTG 61279 Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458 || ||| |||| | || ||| || | | || || || ||||||| | || |||||| Sbjct 61280 TTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATA 61339 Query 63459 TA 63460 || Sbjct 61340 TA 61341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622938665623360