Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq65 93.3 1e-13 seq1062 91.5 4e-13 >seq65 Length=9430 Score = 93.3 bits (102), Expect = 1e-13 Identities = 182/263 (69%), Gaps = 16/263 (6%) Strand=Plus/Minus Query 364903 TGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961 |||| ||| ||| |||||| | |||||||||| | |||||||||| | || ||| | || Sbjct 6305 TGGGATGA-AGCTATGAAGTCCCATATCATCGCTGATAATGGTTCTATCCAAAACTTGCC 6247 Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021 | | ||| |||| || || | | ||||| || || |||||||| || || || Sbjct 6246 AAACATCCCACAAGAGCTAAAAGATTTATACAAGACTGTTTGGGAAATATC---GCAAAA 6190 Query 365022 TCTCATT---GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078 | |||| |||||||| || || || | ||||| ||| ||| ||| ||||| || Sbjct 6189 GCACATTATCGATATGGCCGCTGACCGTGCTGCTTACATCGATCAATCCCAATCGTTGAA 6130 Query 365079 CGT----ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGT 365134 | | |||| || ||| |||| | ||| | || ||||||||||||||||| | Sbjct 6129 CATTCACATTCGTG-CTC---CAACTATGGGTAAGTTGACTTCCATGCATTTCTACGGAT 6074 Query 365135 GGAAATCCGGTCTTAAGACAGGT 365157 |||| ||| | ||||| ||| Sbjct 6073 GGAAGAAGGGTTTGAAGACCGGT 6051 >seq1062 Length=20682 Score = 91.5 bits (100), Expect = 4e-13 Identities = 236/354 (67%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422 || ||| | ||||||||| || |||| ||| || |||| | | || ||| Sbjct 8604 GAGCTTTTATGGTTTATTTCTGGTTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTG 8545 Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-A 111481 || || ||||| || || ||||| ||||| | | || || | || ||| || | | Sbjct 8544 AAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGA 8485 Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541 || || |||||| | ||||| ||||| || || |||||| | || || || ||||| || Sbjct 8484 CGT-GAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCAGAATA 8426 Query 111542 CAAAACCATGCACGACTCATATGATTCA---CAGGGAACTGATCAATTACAGAATGTCAT 111598 ||| || ||| ||| || ||||| || || ||||| ||| |||| || Sbjct 8425 CAAGAC-ATGT--GACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTGAT 8369 Query 111599 TGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAA 111658 | || | | |||||||| || | | | | ||||| ||| ||||||||||| Sbjct 8368 TCATAAGTTGAAGAACAATCCTTATGATAGAAGGATTATCATGTCGGCATGGAACCCTCC 8309 Query 111659 TGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 || || ||||||||| ||||||||||| ||| | | | ||||||||||| Sbjct 8308 TGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGT 8255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303335297657072