Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq65 93.3 1e-13
seq1062 91.5 4e-13
>seq65
Length=9430
Score = 93.3 bits (102), Expect = 1e-13
Identities = 182/263 (69%), Gaps = 16/263 (6%)
Strand=Plus/Minus
Query 364903 TGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961
|||| ||| ||| |||||| | |||||||||| | |||||||||| | || ||| | ||
Sbjct 6305 TGGGATGA-AGCTATGAAGTCCCATATCATCGCTGATAATGGTTCTATCCAAAACTTGCC 6247
Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021
| | ||| |||| || || | | ||||| || || |||||||| || || ||
Sbjct 6246 AAACATCCCACAAGAGCTAAAAGATTTATACAAGACTGTTTGGGAAATATC---GCAAAA 6190
Query 365022 TCTCATT---GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078
| |||| |||||||| || || || | ||||| ||| ||| ||| ||||| ||
Sbjct 6189 GCACATTATCGATATGGCCGCTGACCGTGCTGCTTACATCGATCAATCCCAATCGTTGAA 6130
Query 365079 CGT----ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGT 365134
| | |||| || ||| |||| | ||| | || ||||||||||||||||| |
Sbjct 6129 CATTCACATTCGTG-CTC---CAACTATGGGTAAGTTGACTTCCATGCATTTCTACGGAT 6074
Query 365135 GGAAATCCGGTCTTAAGACAGGT 365157
|||| ||| | ||||| |||
Sbjct 6073 GGAAGAAGGGTTTGAAGACCGGT 6051
>seq1062
Length=20682
Score = 91.5 bits (100), Expect = 4e-13
Identities = 236/354 (67%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422
|| ||| | ||||||||| || |||| ||| || |||| | | || |||
Sbjct 8604 GAGCTTTTATGGTTTATTTCTGGTTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTG 8545
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-A 111481
|| || ||||| || || ||||| ||||| | | || || | || ||| || | |
Sbjct 8544 AAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGA 8485
Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541
|| || |||||| | ||||| ||||| || || |||||| | || || || ||||| ||
Sbjct 8484 CGT-GAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCAGAATA 8426
Query 111542 CAAAACCATGCACGACTCATATGATTCA---CAGGGAACTGATCAATTACAGAATGTCAT 111598
||| || ||| ||| || ||||| || || ||||| ||| |||| ||
Sbjct 8425 CAAGAC-ATGT--GACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTGAT 8369
Query 111599 TGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAA 111658
| || | | |||||||| || | | | | ||||| ||| |||||||||||
Sbjct 8368 TCATAAGTTGAAGAACAATCCTTATGATAGAAGGATTATCATGTCGGCATGGAACCCTCC 8309
Query 111659 TGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
|| || ||||||||| ||||||||||| ||| | | | |||||||||||
Sbjct 8308 TGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGT 8255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303335297657072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |