Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq65 264 1e-65 seq582 172 7e-38 seq35 159 4e-34 >seq65 Length=9430 Score = 264 bits (292), Expect = 1e-65 Identities = 746/1138 (66%), Gaps = 12/1138 (1%) Strand=Plus/Plus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || || || | |||||||||||| |||||||| ||||| || || || | Sbjct 6998 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCA 7057 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 7058 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 7117 Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 7118 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 7175 Query 63001 GTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63060 || || |||||| || || || ||||| ||| | | ||| | ||| ||| | Sbjct 7176 ATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTC 7235 Query 63061 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63120 || | | |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 7236 GTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 7295 Query 63121 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63180 | | ||| || || || |||||| | | |||| ||| | | ||||| || Sbjct 7296 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 7355 Query 63181 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63240 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 7356 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 7415 Query 63241 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 63300 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| || Sbjct 7416 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 7475 Query 63301 GGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63360 || || | || || || | | |||||| || ||| | ||| || || || Sbjct 7476 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 7535 Query 63361 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 63420 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 7536 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATC 7595 Query 63421 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63480 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 7596 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 7655 Query 63481 TAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63540 | || || |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 7656 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 7715 Query 63541 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63600 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 7716 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCG 7775 Query 63601 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63660 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 7776 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 7835 Query 63661 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63720 |||||| || || |||| ||||| | ||| | ||||| | |||| || | || Sbjct 7836 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTTTC 7895 Query 63721 GTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGG 63777 | || | ||| || | || | ||||| ||||| | || | ||| | || || Sbjct 7896 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 7952 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 ||||| | || | || || || | ||||| ||| | || | |||| ||||| Sbjct 7953 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 8012 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 | || || | || ||||||||||| | | | || ||||| || || || || || Sbjct 8013 CAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 8071 Query 63898 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || ||| | |||| || |||| | || ||||| || || |||||||| | ||| Sbjct 8072 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129 >seq582 Length=15002 Score = 172 bits (190), Expect = 7e-38 Identities = 576/884 (65%), Gaps = 18/884 (2%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || ||| | |||||||| ||||| |||||||| | || || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || |||||||| || || || || || ||| || || || || | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | ||| ||||| |||||||| | ||| ||||||| ||| ||||| || | || Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035 Query 32550 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 ||| || ||||| || | ||| | |||| ||| || || || ||||| || || Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1976 Query 32609 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 32664 |||| || | | | | || | | | | | ||||| | || | ||||| | Sbjct 1975 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGTAAACAGG 1920 Query 32665 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 32724 | || ||| ||| | ||| || ||||| | ||| |||||||| || || || | || | Sbjct 1919 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTG 1860 Query 32725 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 32784 |||| | || ||| || | ||| || |||| || || || ||||| || || | | Sbjct 1859 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACAC 1800 Query 32785 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCC 32841 |||| || || || || |||| | ||| || |||| | | || |||| | |||| Sbjct 1799 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCC 1740 Query 32842 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 32900 | || || ||||| | ||||| | ||| | || || || || || ||||| || Sbjct 1739 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 1681 Query 32901 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 32960 | | | | || ||| ||| || | || || |||||||| | ||| | || Sbjct 1680 AAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCG 1621 Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020 || ||||||||||| || ||||| || ||||||||||| | || || | ||| || Sbjct 1620 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGC 1561 Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080 || || | | || ||| | || ||||| ||||| || || || || ||||| Sbjct 1560 ACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 1501 Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCA 33137 ||||| | || || ||| || | ||| ||| || || || ||||| ||| Sbjct 1500 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCA 1441 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | || ||| || || | ||| | |||||| | |||||||| || ||||| || | ||| Sbjct 1440 TGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTA 1381 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || | |||||| || || || | ||||| |||| ||||| Sbjct 1380 TAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 >seq35 Length=84627 Score = 159 bits (176), Expect = 4e-34 Identities = 584/902 (65%), Gaps = 33/902 (4%) Strand=Plus/Plus Query 62438 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62497 ||||| | || | ||||||||| |||||| | ||||| | ||| | | ||||| Sbjct 60449 TCGTAGTGGCCATACTTCTCAGCGAGTTCAATAGATGCCTCAATTGCGGCATGGTAAATA 60508 Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGC-GCTTCCAGGCTATCAAATGGATAATTTA- 62555 ||||| || |||| ||||| | || | || || || ||||| || | | || Sbjct 60509 GTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATTCAAAGGG-TGTTCTAC 60566 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 |||| ||||| || ||||| | |||||||||||||||| | | |||| ||||| || Sbjct 60567 AGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAATGGTCGGTGTCTTAGAT 60626 Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675 | ||| || || |||||||| ||| || ||||||| || ||| ||||| | Sbjct 60627 TGCCTCTTTTTGCCTCCGGAATAGGGTAAGCTCCAACATCTATAGTTCTATCTAGATTCC 60686 Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC------CATC-- 62727 | || | ||||| || ||| | || ||| ||| |||||| |||| Sbjct 60687 TAACCAACACTTTAACAACACGATGAAGGGTGACAAAGTCAAATACAGGAGAATCATCAG 60746 Query 62728 ----TATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780 |||| || || | |||||| || ||||| || ||||| || ||||| || | Sbjct 60747 AAGATATTTTGACGTACGTAGGCAATGCGACTGATGCAAGGTTACAGACTGCTACTTCTT 60806 Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840 | ||| | | || ||| ||||||||| |||| ||| ||||| | Sbjct 60807 CTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGATGACTTAATGACACCTAAGT 60866 Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900 ||| || || ||| | || |||| |||||||||||| ||||| ||| || || | Sbjct 60867 TTTTCTGGTTGGACTTCTCATTGCACGAATCCTTATAAAGCATGAAAGGAACTCCTGTCT 60926 Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG--ATTTGTA 62958 | | ||| || || ||| || ||| | | | || || ||| | ||| | | Sbjct 60927 CCGTTTGACTTTGTAGAATTTCTGACCATATTTGTTGCGCTTTCATTTTTTTCATTGGAA 60986 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 || || || || | || | ||| | || ||| || | | || | || ||| Sbjct 60987 TCAATTCTCGCT--CATACTTTTCATATAGGGTTTTGAATTC-TGTACCATAGCA--GTC 61041 Query 63019 CAGT---CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075 | || | |||||| |||| | | ||||| ||| | | || | || || Sbjct 61042 AGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACG 61101 Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135 || |||||| ||||| |||||||| || || ||||| |||| || || ||| || Sbjct 61102 TTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTC 61161 Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195 ||||| ||||||| | || | | ||| | ||||| ||| |||||| |||||||| Sbjct 61162 TTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAA 61221 Query 63196 GTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253 |||||| || || | || || |||||||| || || || || | ||||| || ||| Sbjct 61222 GTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTG 61279 Query 63254 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313 || ||| |||| | || ||| || | | ||||| || |||||||| | |||||||||| Sbjct 61280 TTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATA 61339 Query 63314 TA 63315 || Sbjct 61340 TA 61341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623319241600